KAIKObase version 3.2.2: May-13-13
- The following changes were made:
- A detailed information page was added to a gene (KBgnXXXXXX).
- The page provides various information including sequences, expression, automated-annotation and orthology.
- You can access detailed information by clicking on a gene (KBgnXXXXXX).
KAIKObase version 3.2.2: Feb-03-12
- The following changes in the previous version (ver.3.2.1) were made:
- Total gene number was changed from 16,449 to 16,823 genes.
- Gene ID 'KBgn' was changed to 'BMgn' with the corresponding 6 numerals.
KAIKObase version 3.2.1: Jan-23-12
- The following changes in the previous version (ver.3.2.0) were made:
- Total 44 FLcDNA sequences were deleted due to a transposon and chimeras, or incomplete sequences.
| Accession Number | Clone name | KBtr number | Reason |
| AK377195 | BmN-03O05 | KBtr3000011 | transposon sequence |
| AK377581 | fe8d05H14 | KBtr3000396 | incomplete sequence |
| AK377583 | fe8d05J13 | KBtr3000398 | incomplete sequence |
| AK377621 | fe8d09C06 | KBtr3000436 | incomplete sequence |
| AK377662 | fe8d14A07 | KBtr3000477 | incomplete sequence |
| AK377707 | fe8d20C23 | KBtr3000522 | incomplete sequence |
| AK377708 | fe8d20E20 | KBtr3000523 | incomplete sequence |
| AK377718 | fe8d21N11 | KBtr3000533 | incomplete sequence |
| AK377742 | fe8d25D10 | KBtr3000557 | incomplete sequence |
| AK377769 | fe8d29K18 | KBtr3000584 | incomplete sequence |
| AK377785 | fe8d33L07 | KBtr3000600 | incomplete sequence |
| AK377812 | fe8d37K12 | KBtr3000627 | incomplete sequence |
| AK377816 | fe8d38A11 | KBtr3000631 | incomplete sequence |
| AK377824 | fe8d39K10 | KBtr3000639 | incomplete sequence |
| AK377828 | fe8d40E09 | KBtr3000643 | incomplete sequence |
| AK377832 | fe8d40J05 | KBtr3000647 | chimera sequence |
| AK377849 | fe8d43K13 | KBtr3000664 | incomplete sequence |
| AK377865 | fe8d45L07 | KBtr3000680 | incomplete sequence |
| AK377869 | fe8d46M07 | KBtr3000684 | incomplete sequence |
| AK377886 | fe8d50P17 | KBtr3000701 | incomplete sequence |
| AK377987 | ffbm20N02 | KBtr3000802 | incomplete sequence |
| AK379152 | ftes06D04 | KBtr3001967 | incomplete sequence |
| AK379228 | ftes08N06 | KBtr3002043 | incomplete sequence |
| AK380631 | fufe06I06 | KBtr3003446 | incomplete sequence |
| AK380684 | fufe09D13 | KBtr3003499 | incomplete sequence |
| AK380831 | fufe17M02 | KBtr3003646 | incomplete sequence |
| AK380983 | fufe25C24 | KBtr3003798 | chimera sequence |
| AK381480 | fufe48G18 | KBtr3004295 | incomplete sequence |
| AK381500 | fufe50A20 | KBtr3004315 | incomplete sequence |
| AK381512 | fufe50J14 | KBtr3004327 | incomplete sequence |
| AK381513 | fufe50L01 | KBtr3004328 | incomplete sequence |
| AK381666 | fwgP09E02 | KBtr3004481 | incomplete sequence |
| AK381673 | fwgP09K13 | KBtr3004488 | incomplete sequence |
| AK384093 | fcaL07G15 | KBtr3006908 | incomplete sequence |
| AK384235 | fcaL13A21 | KBtr3007050 | incomplete sequence |
| AK384377 | fcaL19F01 | KBtr3007192 | incomplete sequence |
| AK384407 | fcaL20O06 | KBtr3007222 | incomplete sequence |
| AK384487 | fcaL24I04 | KBtr3007302 | incomplete sequence |
| AK384795 | fcaL38B09 | KBtr3007610 | incomplete sequence |
| AK385050 | fcaL49D24 | KBtr3007865 | incomplete sequence |
| AK385052 | fcaL49E12 | KBtr3007867 | incomplete sequence |
| AK385059 | fcaL49G22 | KBtr3007874 | incomplete sequence |
| AK385060 | fcaL49H11 | KBtr3007875 | incomplete sequence |
| AK385076 | fcaL50E02 | KBtr3007891 | incomplete sequence |
- Please note that clone names of 7 FLcDNA sequences were changed as follows:
| KBtr number | Accession Number | former clone name | new clone name |
| KBtr3011128 | AK388543 | fcaL30J05 | fcaL44L21 |
| KBtr3003855 | AK381040 | fufe28A16 | fufe38A16 |
| KBtr3000727 | AK377912 | ffbm01J08 | ffbm01F19 |
| KBtr3007975 | AK385160 | e10001B03 | e10001B04 |
| KBtr3000747 | AK377932 | ffbm08C14 | ffbm08G14 |
| KBtr3006862 | AK384047 | fcaL05K15 | fcaL05K16 |
| KBtr3011149 | AK388564 | fwgP29B06 | fwgP29E06 |
KAIKObase version 3.2.0: Nov-25-11
- The following changes in the previous version (ver.3.1.1) were made:
- "Genes" to be annotated by the 'Silkworm Genome Annotation Community' were added in the Keyword search and GBrowse of KAIKObase.
KAIKObase version 3.1.1: Nov-11-11
- The following changes in the previous version (ver.3.1.0) were made:
- Total 69,048 EST sequences were added in the EST database (KAIKOcDNA database).
- Total 15,887 full-length cDNAs derived from original full-length cDNAs and Bombyx mori mRNAs obtained from public database
were incorporated in the KAIKO full-length cDNA database (KAIKOcDNA database).
- 3' SAGE (Serial Analysis of Gene Expression) tags data derived from "posterior silkgland" (PSG) and derived from "middle silkgland" (MSG), both of which were the same developmental stage on fifth instar larval stage (Day 3') were integrated in GBrowse.
- "Locus" was deleted from the GBrowse data and the Keyword search data.
- KAIKObase with the above data was updated.
KAIKObase version 3.1.0: Sep-15-11
- KAIKObase version 3.1.0 with a whole set full-length cDNA database and EST database was released.
KAIKObase version 3.1.0: Nov-26-10
- The following changes in the previous version (ver.3.0.1) were made:
- Full length cDNA database was linked to KAIKObase.
- EST database was linked to KAIKObase.
- Full length cDNA and EST information were added.
- Locus position was added.
KAIKObase version 3.0.1: Jun-30-10
- The following changes in the previous version (ver.3.0.0) were made:
- KAIKOGAAS database was linked to KAIKObase.
KAIKObase version 3.0.0: Feb-26-10
- The following changes in the previous version (ver.2.0.1) were made:
- Core database was changed from text database into Chado database.
- BLAST results are displayed on each chromosome map.
KAIKObase version2.0.1: Feb-06-09
- The changes in the previous version (ver.2)are as follows:
- Top page of KAIKObase layout was changed.
KAIKObase version2: Jan-08-09
- The changes in the previous version (ver.1)are as follows:
- Bombyx Trap DataBase was linked to KAIKObase.
- KAIKO2DDB (proteome database) was linked to KAIKObase.
- Display style of Chromosome Overview has been updated on the top page.
- Search function delimited with chromosome and scaffold position was added to Keyword and Position Search.
- Graphical display function was added to Keyword and Position Search results viewing area.
- Manual editing function for viewing range was added to BLAST results viewing area.
- Download function of sequences file was added to PGmap page.
- GBrowse browser has been updated to version 1.69 from version 1.69 beta.
- Scaffold data was added to Data Sourece in GBrowse.