KAIKObase gene description page [BMgn001162/Gene07878]
Outline
| Official gene ID | BMgn001162 |
|---|---|
| Local gene ID | Gene07878 |
| Chromosome | chr13 |
| Start (Chr.) | 10917496 |
| End (Chr.) | 10929381 |
| Scaffold | Bm_scaf1 |
| Start (Scaf.) | 7062391 |
| End (Scaf.) | 7074276 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001112752.1 | publicly available mRNA | No |
| AK386775 | full-length cDNA | No |
| AK386170 | full-length cDNA | No |
| AK384191 | full-length cDNA | No |
| AK383212 | full-length cDNA | No |
| AK383932 | full-length cDNA | No |
| AK386782 | full-length cDNA | No |
| AK384839 | full-length cDNA | No |
| AK383083 | full-length cDNA | Yes |
| AK386070 | full-length cDNA | No |
| AK383155 | full-length cDNA | No |
| BGIBMGA001162 | predicted gene | No |
Representative sequence
Nucleotide
GATAGTTGCCGCTAAGACATAGCGGGGTGAATATAAAATTGCGAACTAACATTACTCGTTAGTAGCTGGACTTACAAAGGTAGGGACATTTTGTTTTTTAGTATACATTAGTTTAACTGTGAACATGTGAAAATTTTGTTGTGTTTTTAAACATAAACATTTCTCATTTAATTTTCTTTGAAACGATATTTTATTTTCTTTGTGGAATATACGGTAAGCTGTGAACGTAAAATATCTCAATAGAAAAAATATCTCAACATGAGCTACACAAACGCAGAAAATGTGGTGCCTACAAGCACGTTTTCTGCGATCAACCTCTTCTATGTGTTACTTGTGCCGGCCGTAATCCTCTGGTACGCCTACTGGCGAATGTCAAGGCGGCGGTTGTATGAGCTTGCTGACAAATTAAACGGGCCTCCAGGACTTCCGTTACTCGGGAACGCCCTGGAATTCGTCGGTGGATCTGCTGACATCTTCAGAAACATAGTTCAGAAGAGCGCTGACTACGATCACGAATCCGTCGTTAAGATCTGGATAGGACCCCGTCTCCTCGTCTTTCTGTACGATCCTCGCGACGTGGAAGTTATCCTGAGTAGTCACGTTTACATCGATAAAGCTGAGGAATACCGTTTCTTCAAACCATGGCTCGGAAACGGTCTTCTTATCAGTACTGGTCAAAAATGGAGGTCTCATCGTAAACTTATCGCTCCCACATTCCATCTGAACGTTTTGAAGAGTTTCATAGAGTTATTCAATGCCAACTCAAGAGCTGTTGTGGACAAACTTAAAAAAGAAGCCAGTAATTTTGATTGCCATGACTACATGAGCGAGTGCACGGTTGAAATTTTACTGGAAACTGCTATGGGTGTGAGCAAGAGTACACAAGATCAAAGCGGATTCGAATATGCTATGGCCGTCATGAAAATGTGCGATATACTTCACTTGAGACACACAAAGATTTGGCTGCGACCGGATTTGTTATTTAAATTTACAGATTACGCTAAAAACCAAACCAAGCTCCTTGATATAATTCATGGCTTGACTAAAAAGGTAATAAAGAGGAAGAAAGAAGAATTCGCATCTGGTAAGAAGCCGTCCAATTTGAATGAAACTGCCACCACAAGCGAGCCGTCTACGGGGAAATTGACTTCAGTGGAAGGACTTTCTTTCGGCCAATCATCCGGTCTCAAGGATGACTTAGATGTTGACGATGATGTCGGACAAAAGAAACGTTTGGCCTTCCTTGATCTGTTGCTGGAGAGTTCACAAAGTGGTGTGGCCATTTCCGACGAGGAAATCAAAGAACAAGTAGACACTATCATGTTTGAGGGTCACGACACAACAGCTGCCGGAAGTAGTTTCTTCCTATCAATGATGGGTATTCATCAAGATATACAAGACAAAGTCATTGAAGAACTGGACCAGATATTTGGTGACTCAGATCGCCCAGTTACGTTCCAAGACACTTTGGAGATGAAGTACTTGGAAAGGTGCCTTATGGAAACTCTGAGATTATACCCGCCAGTGCCGATCATCGCTCGGCAAGTTAATCAAGAAATTACCTTACCATCCAATGGAAAGAAAATCCCAGCCGGAACAACATTGGTGATAGCTACATATAAACTTCATCGCCGCCCTGACGTTTACCCAAATCCAAACAAATTTGACCCTGACAACTTCCTTCCGGAACGTTCCGCCAACAGACATTATTATGCGTTCGTGCCTTTTTCAGCTGGACCAAGAAGTTGCGTTGGACGTAAATACGCAATGCTCAAATTGAAGGTGATCCTTTCTACAATTTTGAGAAATTTCCGAGTAATATCAGATCTTAAGGAATCAGATTTCAAACTGCAAGCGGACATCATTCTGAAACGGGCCGAAGGATTCCAAGTACGCTTACAGCCCCGCAAGAGAATGGCCAAGGCTTAAAATAATAATTTGAATCCAAAATTAATAACCAGCATGACCAAATTAATCACAACAATACATGATAATATATCAATCAAATGTCTTTGTAAATTTCAAGATTTCAGTTAATAAACTTGAAGCAGTCATTTGTGATTTAAGCGACATACAAAACAAACCTTTAAATTTGTATTCATATTTATATTATTTTGTGCTAAATAGCTTCTACATCAATAACTTTTGACGCTTAAGTCTTTAACAAGAAATTCATATTTAGATAGTTCATGTTCTTAAAGATCTTAACTTAATGTGATAACAGTGAACTGAATAAATTATTATTGATACTAAAACAAAGACGTTCAAATGGTGGTAGAGCTCTTTAATAGGGAAGGTACAAAGATGGGCACGGAGAAATTGCTCAATTACGAATAAATTAAGTTTGTAAATAGGTATTTAAGGTACGTTTAATGAGAAAAATATTACATAAAATAAATGGAAATTTGAGTAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAGTACC
ORF
ATGAGCTACACAAACGCAGAAAATGTGGTGCCTACAAGCACGTTTTCTGCGATCAACCTCTTCTATGTGTTACTTGTGCCGGCCGTAATCCTCTGGTACGCCTACTGGCGAATGTCAAGGCGGCGGTTGTATGAGCTTGCTGACAAATTAAACGGGCCTCCAGGACTTCCGTTACTCGGGAACGCCCTGGAATTCGTCGGTGGATCTGCTGACATCTTCAGAAACATAGTTCAGAAGAGCGCTGACTACGATCACGAATCCGTCGTTAAGATCTGGATAGGACCCCGTCTCCTCGTCTTTCTGTACGATCCTCGCGACGTGGAAGTTATCCTGAGTAGTCACGTTTACATCGATAAAGCTGAGGAATACCGTTTCTTCAAACCATGGCTCGGAAACGGTCTTCTTATCAGTACTGGTCAAAAATGGAGGTCTCATCGTAAACTTATCGCTCCCACATTCCATCTGAACGTTTTGAAGAGTTTCATAGAGTTATTCAATGCCAACTCAAGAGCTGTTGTGGACAAACTTAAAAAAGAAGCCAGTAATTTTGATTGCCATGACTACATGAGCGAGTGCACGGTTGAAATTTTACTGGAAACTGCTATGGGTGTGAGCAAGAGTACACAAGATCAAAGCGGATTCGAATATGCTATGGCCGTCATGAAAATGTGCGATATACTTCACTTGAGACACACAAAGATTTGGCTGCGACCGGATTTGTTATTTAAATTTACAGATTACGCTAAAAACCAAACCAAGCTCCTTGATATAATTCATGGCTTGACTAAAAAGGTAATAAAGAGGAAGAAAGAAGAATTCGCATCTGGTAAGAAGCCGTCCAATTTGAATGAAACTGCCACCACAAGCGAGCCGTCTACGGGGAAATTGACTTCAGTGGAAGGACTTTCTTTCGGCCAATCATCCGGTCTCAAGGATGACTTAGATGTTGACGATGATGTCGGACAAAAGAAACGTTTGGCCTTCCTTGATCTGTTGCTGGAGAGTTCACAAAGTGGTGTGGCCATTTCCGACGAGGAAATCAAAGAACAAGTAGACACTATCATGTTTGAGGGTCACGACACAACAGCTGCCGGAAGTAGTTTCTTCCTATCAATGATGGGTATTCATCAAGATATACAAGACAAAGTCATTGAAGAACTGGACCAGATATTTGGTGACTCAGATCGCCCAGTTACGTTCCAAGACACTTTGGAGATGAAGTACTTGGAAAGGTGCCTTATGGAAACTCTGAGATTATACCCGCCAGTGCCGATCATCGCTCGGCAAGTTAATCAAGAAATTACCTTACCATCCAATGGAAAGAAAATCCCAGCCGGAACAACATTGGTGATAGCTACATATAAACTTCATCGCCGCCCTGACGTTTACCCAAATCCAAACAAATTTGACCCTGACAACTTCCTTCCGGAACGTTCCGCCAACAGACATTATTATGCGTTCGTGCCTTTTTCAGCTGGACCAAGAAGTTGCGTTGGACGTAAATACGCAATGCTCAAATTGAAGGTGATCCTTTCTACAATTTTGAGAAATTTCCGAGTAATATCAGATCTTAAGGAATCAGATTTCAAACTGCAAGCGGACATCATTCTGAAACGGGCCGAAGGATTCCAAGTACGCTTACAGCCCCGCAAGAGAATGGCCAAGGCTTAA
Protein
MSYTNAENVVPTSTFSAINLFYVLLVPAVILWYAYWRMSRRRLYELADKLNGPPGLPLLGNALEFVGGSADIFRNIVQKSADYDHESVVKIWIGPRLLVFLYDPRDVEVILSSHVYIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIELFNANSRAVVDKLKKEASNFDCHDYMSECTVEILLETAMGVSKSTQDQSGFEYAMAVMKMCDILHLRHTKIWLRPDLLFKFTDYAKNQTKLLDIIHGLTKKVIKRKKEEFASGKKPSNLNETATTSEPSTGKLTSVEGLSFGQSSGLKDDLDVDDDVGQKKRLAFLDLLLESSQSGVAISDEEIKEQVDTIMFEGHDTTAAGSSFFLSMMGIHQDIQDKVIEELDQIFGDSDRPVTFQDTLEMKYLERCLMETLRLYPPVPIIARQVNQEITLPSNGKKIPAGTTLVIATYKLHRRPDVYPNPNKFDPDNFLPERSANRHYYAFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFRVISDLKESDFKLQADIILKRAEGFQVRLQPRKRMAKA*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF00067.17 | Cytochrome P450 | |
| BLASTP/NCBI-nr | NP_001106223 | cytochrome P450 CYP4G25 [Bombyx mori] gb|ABF51415.1| cytochrome P450 CYP4G25 [Bombyx mori] | 0.0 |
| InterPro | IPR001128 | Cyt_P450 | |
| InterPro | IPR017972 | Cyt_P450_CS | |
| InterPro | IPR002401 | Cyt_P450_E_grp-I | |
| Gene Ontology(MF) | GO:0009055 | electron carrier activity | |
| Gene Ontology(MF) | GO:0020037 | heme binding | |
| Gene Ontology(MF) | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| Gene Ontology(MF) | GO:0005506 | iron ion binding | |
| Gene Ontology(BP) | GO:0055114 | oxidation-reduction process |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|---|---|---|
| Gene07918 | BMgn001005 | chr13 | 12099787 | 12109000 | Bm_scaf1 | 5882772 | 5891985 | - |
| Gene07917 | BMgn001004 | chr13 | 12085593 | 12092531 | Bm_scaf1 | 5899241 | 5906179 | - |
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| D. plexippus | DPOGS211931 | DPSCF300011 | 339372 | 343017 | + |
| D. plexippus | DPOGS205654 | DPSCF300023 | 316318 | 321220 | + |
| H. melpomene | HMEL016705 | HE671591 | 1337669 | 1347334 | - |
| H. melpomene | HMEL006588 | HE670454 | 44520 | 50967 | - |
| M. sexta | Msex005316-RA | scaffold00083 | 201928 | 219870 | + |
| M. sexta | Msex006579-RA | scaffold00115 | 278553 | 294089 | - |
| M. sexta | Msex006580-RA | scaffold00115 | 297752 | 318458 | - |
| P. xylostella | Px008026.1 | scaffold_286 | 50304 | 54942 | + |
| P. xylostella | Px007099.1 | scaffold_25 | 1012110 | 1018813 | + |