KAIKObase gene description page [BMgn001573/Gene12156]
Outline
| Official gene ID | BMgn001573 |
|---|---|
| Local gene ID | Gene12156 |
| Chromosome | chr21 |
| Start (Chr.) | 12247532 |
| End (Chr.) | 12253396 |
| Scaffold | Bm_scaf7 |
| Start (Scaf.) | 6030341 |
| End (Scaf.) | 6036205 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001111356.1 | publicly available mRNA | No |
| AK378442 | full-length cDNA | Yes |
| BGIBMGA001573 | predicted gene | No |
Representative sequence
Nucleotide
TAAATGAATTGATATGTATTTAATGGTACATTCGGTGCGCGTGGGCCTGACACGGCGCGTGCTCTGACGCAGGGGAAAACAGTATAATTTAATATAAATAGCGACGAACGGTTTCTTAGTAATCAAACCTCCTCGGTGGTCACTCCAAGATGCTCACGGCTTACCTCCTGTATGTGTTCGCTTCAATAGTGGTGTTAATTTATTTTTATCTCAATAATAAATACAAATATTGGAAAAATAAAAACATAGCCGGTCCGGAGCCGGAATTTTTGTTTGGGAATTTGAAGGAAAGCTTCCACAGGAGGAAGCATATCGCGACCGTCTTCAAGGAGATATACGATCAGTACCCCGATGAGAAGGTAGTGGGAATGTTCAGAATGACATCTCCTACGTTGATAGTGCGCGACTTGGACATTGTCAAACAGATAATGATCAAAGACTATGCCAAGTTCAACGAGAGAGGCATTAAGTTCAGCAAGGAAGGGCTCGGAGACAACCTGTTCCATGCTGATGCTGACGCTTGGAAAGCGGTAAGAAGCCACCTGACGCCGATGTTTAGTTCGGGAAAATTAAAGAACATGGTGAGGGTGTTGTCGCAAACGGGAGACCGGTTTGTGGACCACGTCACCAACGAAGTTCGCTTGCGACCCGAACAAGAGCTCGTATCCCTGTTCCTCAAGTACAACATCGCGACTATAATGGCTTGCAGCTTCAGCATGGAAACCGATATCAACGACATGCAAGTATATGAGATGCTCAACGTTGCTGTCTTCGAAAACAGCTACATCAGCGAATTGGATATGGTGTTCCCGGGAATTCTGAGGAAAACGAACCGATCGATTTTCGGGCCGACCGTCAACAATTTCTGCTATGAGATTGTCGAATTTATTAAAAACGAAAGGAACGGAAAGCCAGCCAACAGAAACGACATGATGGATATGCTGTTAGGTGTCAATTGTGATAAATTAAAAATGAAAAATGGCAGCGAAGATTTTGTTGAAATCACCGAGCATGTGATGGCTGGACAAGTGTTTGTCTTCTTTGCAGCCGGGTACGTTAATAATACGATCACGCTGACATTCTCTCTGTACCATTTGGCGAAAGATCAAAGCATTCAAGAAAGGTTAATGAGGGAAATAGAGACGGTGCTGGAAAACCATAACAACGTATTGACTCTTGAAGCGATTAACGAGATGAGTTACTTGGAGATGATATTTCTCGAAACCTTGAGGATGCACCCGACAACGAACACACTCCAACGCTCTGCTTTAGAAGATTACACGATACCTGGGACGGACATAGAGATCGAAAAGGGCACATTAGTGCTCATACCCCCCTTGGCTTTTCATCACGACGAGAAAATTTACCCTGAACCTGAGAAGTTTGATCCTGAAAGATTTTCCGTAGAGAATCACAAGAGCCGGCATGCTTGTGCGTTTTTGTCTTTCGGAATCGGCCCACGGACCTGTATAGGCATCAGATTAGCGAAATTACAATACAAAGTTTGCATGGTCAAGTTCCTAACGAAGTATCGAGTGGCGCCGTCTACGAGAACGAAGGATGCGTACAAGATTGATCCCCTAAGGACGGCTTTGGAACCTGAAGGAGGCGTTTATGTTGATATACTACCAAGATCTTAAACGACTTTGCCCGTAAAGGCAACTTTGGAAATGTCAATTTGCAGGATTCTGTAAATTCATAACGAGAATAATGTACATCTCTGTTCGTTTTAGAACTCACCATAGAGTTCAGTTTAGTTTACTCTATGGTATGTCTCAGAGACCATAAATTACCTATTCACTGCACGTAATATGAATCGATCACCAGTGATATTGACATGACTTAATATAATCTCAAAATGTCGATATTTTGTCTCAATATTGGCGGTGGCTATCATGTTTGTGAATTTGGCGTTATTGTGGTGCTGGGTGTTAATGGGTTATGGTAATCACACAACCCCGAGTGGCCCATGTACATCTCTGTTCGTTTTAGAGTTCAATTTAGTTTACTCTATGGTATGTCTCAGAGACCACAAATTACTTATTCACTGCACGTAATATGAATCGATCACCAGTGATATTGACATGACTGAATATAATCTCAAAATGTCGATATTTTGTCTCAATATTGGCGGTGGCTATCATGCTTGTGAATTTGGCGTTATTGTGGTAGTTGGTGCTAATGGATTATGGTAATCACACAACCCCGAGTGGCCCATGTACATCTCTGTTCGTTTTAGAGTTAAATTTAGTTTACTCTATGGTATGTCTCAGAGACCACAAATTACTTATTCACTGCACGTAATATGAATCGATCACCAGTGATATTGACATGACTGAATATAATCTCAAAATGTCGATATTTTGTCTCAATATTGGCGGTGGCTATCATGTTTGTGAATTTGGCGTTATTGTGGTGGTGGGTGCTAATGGGTTATGGTAATCACACAACCCCGAGTGGCCCATGTATATCTCTGTTCGTTTTAGAGTTCAATTTAGTTTACTCTGTGGTATGTCTCAGAGACCACAAATTACTTATTCACTGCACGTAATATGAATCGATCACCAGTGATATTGACATGACTGAATATAATCTCAAAATGTCGATATTTTGTCTCAATACTGGCGGTGGCTATCATGTTTGTGAATTTGGCGTTATTGTGGTGGTGGGTGCTAATGGATTATGGTAATCACACAACCCCGAATGGTCCATAGCGCCACCGCCTGTCCGCTATGGAAAAATAGCGGGCAGCTGATTGAATATCATTCAATGTACTATTTGGAATTCGGCTTTAAAATAATTAATTTTATTTATTTTAATTATAAGTGTTGTTTGTTTATTTTGGAAATATTTTGTTGTTTCTATGAATTAAATATATGTTTAATAATAATGTTTAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ORF
ATGCTCACGGCTTACCTCCTGTATGTGTTCGCTTCAATAGTGGTGTTAATTTATTTTTATCTCAATAATAAATACAAATATTGGAAAAATAAAAACATAGCCGGTCCGGAGCCGGAATTTTTGTTTGGGAATTTGAAGGAAAGCTTCCACAGGAGGAAGCATATCGCGACCGTCTTCAAGGAGATATACGATCAGTACCCCGATGAGAAGGTAGTGGGAATGTTCAGAATGACATCTCCTACGTTGATAGTGCGCGACTTGGACATTGTCAAACAGATAATGATCAAAGACTATGCCAAGTTCAACGAGAGAGGCATTAAGTTCAGCAAGGAAGGGCTCGGAGACAACCTGTTCCATGCTGATGCTGACGCTTGGAAAGCGGTAAGAAGCCACCTGACGCCGATGTTTAGTTCGGGAAAATTAAAGAACATGGTGAGGGTGTTGTCGCAAACGGGAGACCGGTTTGTGGACCACGTCACCAACGAAGTTCGCTTGCGACCCGAACAAGAGCTCGTATCCCTGTTCCTCAAGTACAACATCGCGACTATAATGGCTTGCAGCTTCAGCATGGAAACCGATATCAACGACATGCAAGTATATGAGATGCTCAACGTTGCTGTCTTCGAAAACAGCTACATCAGCGAATTGGATATGGTGTTCCCGGGAATTCTGAGGAAAACGAACCGATCGATTTTCGGGCCGACCGTCAACAATTTCTGCTATGAGATTGTCGAATTTATTAAAAACGAAAGGAACGGAAAGCCAGCCAACAGAAACGACATGATGGATATGCTGTTAGGTGTCAATTGTGATAAATTAAAAATGAAAAATGGCAGCGAAGATTTTGTTGAAATCACCGAGCATGTGATGGCTGGACAAGTGTTTGTCTTCTTTGCAGCCGGGTACGTTAATAATACGATCACGCTGACATTCTCTCTGTACCATTTGGCGAAAGATCAAAGCATTCAAGAAAGGTTAATGAGGGAAATAGAGACGGTGCTGGAAAACCATAACAACGTATTGACTCTTGAAGCGATTAACGAGATGAGTTACTTGGAGATGATATTTCTCGAAACCTTGAGGATGCACCCGACAACGAACACACTCCAACGCTCTGCTTTAGAAGATTACACGATACCTGGGACGGACATAGAGATCGAAAAGGGCACATTAGTGCTCATACCCCCCTTGGCTTTTCATCACGACGAGAAAATTTACCCTGAACCTGAGAAGTTTGATCCTGAAAGATTTTCCGTAGAGAATCACAAGAGCCGGCATGCTTGTGCGTTTTTGTCTTTCGGAATCGGCCCACGGACCTGTATAGGCATCAGATTAGCGAAATTACAATACAAAGTTTGCATGGTCAAGTTCCTAACGAAGTATCGAGTGGCGCCGTCTACGAGAACGAAGGATGCGTACAAGATTGATCCCCTAAGGACGGCTTTGGAACCTGAAGGAGGCGTTTATGTTGATATACTACCAAGATCTTAA
Protein
MLTAYLLYVFASIVVLIYFYLNNKYKYWKNKNIAGPEPEFLFGNLKESFHRRKHIATVFKEIYDQYPDEKVVGMFRMTSPTLIVRDLDIVKQIMIKDYAKFNERGIKFSKEGLGDNLFHADADAWKAVRSHLTPMFSSGKLKNMVRVLSQTGDRFVDHVTNEVRLRPEQELVSLFLKYNIATIMACSFSMETDINDMQVYEMLNVAVFENSYISELDMVFPGILRKTNRSIFGPTVNNFCYEIVEFIKNERNGKPANRNDMMDMLLGVNCDKLKMKNGSEDFVEITEHVMAGQVFVFFAAGYVNNTITLTFSLYHLAKDQSIQERLMREIETVLENHNNVLTLEAINEMSYLEMIFLETLRMHPTTNTLQRSALEDYTIPGTDIEIEKGTLVLIPPLAFHHDEKIYPEPEKFDPERFSVENHKSRHACAFLSFGIGPRTCIGIRLAKLQYKVCMVKFLTKYRVAPSTRTKDAYKIDPLRTALEPEGGVYVDILPRS*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF00067.17 | Cytochrome P450 | |
| BLASTP/NCBI-nr | ABX64441 | cytochrome P450 CYP6AU1 [Bombyx mandarina] | 0.0 |
| InterPro | IPR001128 | Cyt_P450 | |
| InterPro | IPR002401 | Cyt_P450_E_grp-I | |
| InterPro | IPR017972 | Cyt_P450_CS | |
| Gene Ontology(MF) | GO:0009055 | electron carrier activity | |
| Gene Ontology(MF) | GO:0020037 | heme binding | |
| Gene Ontology(MF) | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| Gene Ontology(MF) | GO:0005506 | iron ion binding | |
| Gene Ontology(BP) | GO:0055114 | oxidation-reduction process |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| M. sexta | Msex002983-RA | scaffold00036 | 597377 | 656272 | + |
| M. sexta | Msex008013-RA | scaffold00157 | 531846 | 542582 | - |
| P. xylostella | Px008489.1 | scaffold_30 | 1210747 | 1217884 | + |