KAIKObase gene description page [BMgn001964/Gene10986]
Outline
| Official gene ID | BMgn001964 |
|---|---|
| Local gene ID | Gene10986 |
| Chromosome | chr19 |
| Start (Chr.) | 3165388 |
| End (Chr.) | 3167647 |
| Scaffold | Bm_scaf28 |
| Start (Scaf.) | 3388485 |
| End (Scaf.) | 3390744 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| AK378489 | full-length cDNA | Yes |
| BGIBMGA001964 | predicted gene | No |
Representative sequence
Nucleotide
TAAATGAATTGAGTACAAAAACAATTGTTATGAATCGTGCTATTATTAGTTTAAAATTGTAATTAAAATCGACATGACAGCACTGAATATTGTTTTTTTAACATTTCTGTGTGTAGCCGTCGAAGGCGGCGTGATTGTGGAGACAAATAGTGGTAAAGTAGAAGGTTTAGAAGTGAAATCTATAATTAAAGATGAGAAATTTTACTCATTTCTGAGTATACCATACGGAAAAGCACCGATTGGTGCGTTAAGGTTCAAGGCACCTCAACCTCATGAAGGCTGGACCGATGTTTTAAATGCCAAGAAGGAAAGAAAACAATGCGCTCAATATTACGTTCCAATGAGACCCGTTGATGAGGTTGGTTTTTGCGGCTCAGAAGATTGCCTTCACTTGAACATCCACACTCCAAAACTTCCAAACAATAACGAACCGAATCTACCAGTCATAGTTTTCCTTTACAATGAATATTTCAGAATAACATATAACGCCTCAAAAGAATATGGCCCTGATTTCTTTATGAAAGAAGATGTTATTCTTGTCACCATAAGTCACAGAGTAGGAACATTTGGGTTCGTATCATTTGGTGACGATCTGCTGCCGGGTAATTCCGGGGTAAAAGATGTCATATTAGCATTGAAATGGATACAATCGAACATTAACAAATTCGGAGGAAACCCTTTCAAAATAACTTTAATGGGCCAAGATGGAGGTGCCGCTATGGTGGACATTCTGCTACATTCACCTAAAGCTAAAGGTTTATTCAGCGGTGCGATTTTACAAAGTGGCACGGCATATAGTTCCATGTTTTTCAATACGAAACCGAAAGATAGAGCTTTAGCCATAGCTGAAGTTCTTGAGAGGAAATTGAGTAACAGCGCCCAATTTATTAGCGAGTTGGGCTCTATAGCTGCTCCGAAAATAAGCGAATCGGAACTGATGGCTATTCACGCTGACGATTCGCGGAAATATCAAGTTCCTATTCTCGCAAACGGTCCTGTTGTTGAACACGACCATCCGGACGCGGTCATTACTAAGCGTCCTGAAGACAGCTTTCTTGATGTCGAAATCCCCATCATGATTGGATACAACACCCGAGAAAGTATTGAAATGATGGAACGCTATTTACGGAAACCACAGTATTTGACGTTTGCTGATCGCGATTTCCTGATGATGTTTCCAATTCGAGTGGATTATCATTTCGAGCTTAATACAAATGTATATTACGAAGCTATCCAAGAGATCAAAGACTTCTATTTAGAAGAGGGCTACGTCAAAATCAGTAAGCCCGGTGAATTTATGACCTACATGACGGATATAAACACTTTTTACTCTGTCGATTACGCTGTCAGGAGATATTTGAATGAAAGTTCTGCTCAAATCTATTATTATGCATTTGACTACAGCGGCGACTTGAATATGAGGAAACAGAATATATTAAAAGACGCAATGATATTGGAAGGCACATGGGGTGCGTCGATTGGTGATGAACTTTGTTATCTATTTGTATGCAAACCGATTATTAAAACTTACTTGAAGGCGTTGGCTGAAGAAGATTCAGAAGAAATTAAAGTATTAAAATCTATGGTACGCATGTGGACAAATTTCGCTAAAACTGGGAACCCAACTCCACCTGGTGAGTCGTTTCAATGGAAACCTGCAGCTAAAAACACCAAAGACTGTTTGATGATTAGTGATGAACTGGAGATGAAGACCAACTTGCACGAGGATAGAATAAAGTTCTGGGATGATTTTATTGAAAAATACAGACAGATAGCTGTAGATGGTGTCGTCAAAGGAACCAAAGATGAACTTTAGATGAATAAATAAAAAAATTATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ORF
ATGACAGCACTGAATATTGTTTTTTTAACATTTCTGTGTGTAGCCGTCGAAGGCGGCGTGATTGTGGAGACAAATAGTGGTAAAGTAGAAGGTTTAGAAGTGAAATCTATAATTAAAGATGAGAAATTTTACTCATTTCTGAGTATACCATACGGAAAAGCACCGATTGGTGCGTTAAGGTTCAAGGCACCTCAACCTCATGAAGGCTGGACCGATGTTTTAAATGCCAAGAAGGAAAGAAAACAATGCGCTCAATATTACGTTCCAATGAGACCCGTTGATGAGGTTGGTTTTTGCGGCTCAGAAGATTGCCTTCACTTGAACATCCACACTCCAAAACTTCCAAACAATAACGAACCGAATCTACCAGTCATAGTTTTCCTTTACAATGAATATTTCAGAATAACATATAACGCCTCAAAAGAATATGGCCCTGATTTCTTTATGAAAGAAGATGTTATTCTTGTCACCATAAGTCACAGAGTAGGAACATTTGGGTTCGTATCATTTGGTGACGATCTGCTGCCGGGTAATTCCGGGGTAAAAGATGTCATATTAGCATTGAAATGGATACAATCGAACATTAACAAATTCGGAGGAAACCCTTTCAAAATAACTTTAATGGGCCAAGATGGAGGTGCCGCTATGGTGGACATTCTGCTACATTCACCTAAAGCTAAAGGTTTATTCAGCGGTGCGATTTTACAAAGTGGCACGGCATATAGTTCCATGTTTTTCAATACGAAACCGAAAGATAGAGCTTTAGCCATAGCTGAAGTTCTTGAGAGGAAATTGAGTAACAGCGCCCAATTTATTAGCGAGTTGGGCTCTATAGCTGCTCCGAAAATAAGCGAATCGGAACTGATGGCTATTCACGCTGACGATTCGCGGAAATATCAAGTTCCTATTCTCGCAAACGGTCCTGTTGTTGAACACGACCATCCGGACGCGGTCATTACTAAGCGTCCTGAAGACAGCTTTCTTGATGTCGAAATCCCCATCATGATTGGATACAACACCCGAGAAAGTATTGAAATGATGGAACGCTATTTACGGAAACCACAGTATTTGACGTTTGCTGATCGCGATTTCCTGATGATGTTTCCAATTCGAGTGGATTATCATTTCGAGCTTAATACAAATGTATATTACGAAGCTATCCAAGAGATCAAAGACTTCTATTTAGAAGAGGGCTACGTCAAAATCAGTAAGCCCGGTGAATTTATGACCTACATGACGGATATAAACACTTTTTACTCTGTCGATTACGCTGTCAGGAGATATTTGAATGAAAGTTCTGCTCAAATCTATTATTATGCATTTGACTACAGCGGCGACTTGAATATGAGGAAACAGAATATATTAAAAGACGCAATGATATTGGAAGGCACATGGGGTGCGTCGATTGGTGATGAACTTTGTTATCTATTTGTATGCAAACCGATTATTAAAACTTACTTGAAGGCGTTGGCTGAAGAAGATTCAGAAGAAATTAAAGTATTAAAATCTATGGTACGCATGTGGACAAATTTCGCTAAAACTGGGAACCCAACTCCACCTGGTGAGTCGTTTCAATGGAAACCTGCAGCTAAAAACACCAAAGACTGTTTGATGATTAGTGATGAACTGGAGATGAAGACCAACTTGCACGAGGATAGAATAAAGTTCTGGGATGATTTTATTGAAAAATACAGACAGATAGCTGTAGATGGTGTCGTCAAAGGAACCAAAGATGAACTTTAG
Protein
MTALNIVFLTFLCVAVEGGVIVETNSGKVEGLEVKSIIKDEKFYSFLSIPYGKAPIGALRFKAPQPHEGWTDVLNAKKERKQCAQYYVPMRPVDEVGFCGSEDCLHLNIHTPKLPNNNEPNLPVIVFLYNEYFRITYNASKEYGPDFFMKEDVILVTISHRVGTFGFVSFGDDLLPGNSGVKDVILALKWIQSNINKFGGNPFKITLMGQDGGAAMVDILLHSPKAKGLFSGAILQSGTAYSSMFFNTKPKDRALAIAEVLERKLSNSAQFISELGSIAAPKISESELMAIHADDSRKYQVPILANGPVVEHDHPDAVITKRPEDSFLDVEIPIMIGYNTRESIEMMERYLRKPQYLTFADRDFLMMFPIRVDYHFELNTNVYYEAIQEIKDFYLEEGYVKISKPGEFMTYMTDINTFYSVDYAVRRYLNESSAQIYYYAFDYSGDLNMRKQNILKDAMILEGTWGASIGDELCYLFVCKPIIKTYLKALAEEDSEEIKVLKSMVRMWTNFAKTGNPTPPGESFQWKPAAKNTKDCLMISDELEMKTNLHEDRIKFWDDFIEKYRQIAVDGVVKGTKDEL*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF07859.8 | alpha/beta hydrolase fold | |
| Pfam/Hmmer3 | PF00135.23 | Carboxylesterase family | |
| BLASTP/NCBI-nr | ABU88425 | carboxylesterase-like protein [Helicoverpa armigera] | 0.0 |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|---|---|---|
| Gene10985 | BMgn016569 | chr19 | 3161237 | 3164612 | Bm_scaf28 | 3391520 | 3394895 | + |
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| D. plexippus | DPOGS215930 | DPSCF300308 | 153655 | 155997 | - |
| D. plexippus | DPOGS215929 | DPSCF300308 | 156566 | 158404 | - |
| D. plexippus | DPOGS215928 | DPSCF300308 | 159365 | 161284 | - |
| H. melpomene | HMEL010712 | HE671126 | 24135 | 30520 | - |
| M. sexta | Msex007307-RA | scaffold00134 | 683976 | 695835 | + |
| P. xylostella | Px002735.1 | scaffold_140 | 1163157 | 1165640 | - |
| P. xylostella | Px002736.1 | scaffold_140 | 1169441 | 1175060 | - |