KAIKObase gene description page [BMgn002902/Gene05890]
Outline
| Official gene ID | BMgn002902 |
|---|---|
| Local gene ID | Gene05890 |
| Chromosome | chr10 |
| Start (Chr.) | 17246785 |
| End (Chr.) | 17249483 |
| Scaffold | Bm_scaf30 |
| Start (Scaf.) | 1953892 |
| End (Scaf.) | 1956590 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| BGIBMGA002902 | predicted gene | Yes |
Representative sequence
Nucleotide
ATGCTGCGATTGGTTGCTCTTTTGGGCTTGTTGTCGGCGGTGGCTGCCCGGTTGAGGATAGACCCGCTTGTTGATACTCAGCGGGGCCTCATCAGGGGACTGAGGTCCGAAAATGGAAAGTTCTCGAAGTTTTTGGGCATACCGTACGCACTAGTCGACGAGGACAATCCTTTCGGGCCATCAGTACCACACCCTGGTTTCGAAGAGACATTCGAAGCGTACGATGATTCCGTAGTTTGTCCTCAAGTTACTAATAACGTCGGAGTTGGTAGTCTCCAGTGTTTGAACCTGAACGTTTATGTCTCAAACACGGCTACATCGCGCAACAAGCGCCCCGTGATGGTTTGGATCCACGGAGGAGGATACACTAGCGGCAGCGGGACAGAGCGGGACTACTCCTTCGACGACCTGGTCCGACATGACGTCATCGTCGTATCGGTCAGCTACCGACTCGGACTCTATGGGTTCTTATGTTTGGACAGTCCTGATTTTCCCGGCAACCAGGGTATGAAGGATCAAGTTCTTGCTTTGAGATGGATTAAGGAAAATATCGAAGCGTTCGGCGGAGATGCCTCTAAAATAACCTTATTTGGAGAAAGTGCTGGCGGCGCCGCTGTCGAGCTACACCTACTGACCGACCAGGATAAGCTGTTCAATCAGGTGATCATTCAGAGTGGATCTGCTTTCTTTCCTGGGGGTATTGGGCAACCTAGAAACCGTGTTCCAATAGAAATAGCAAGCCAGCTGGGATTCAAAACTGACAACTTCTTAGAGGCGGTAAAGTTTCTGGCCGATCAAGACCCCCACCTGGTGGTTGCAGCCAGCACTTCTCAAAGCTCTACCTTAAGAGGCGGTACACTCAAACCTTGCAGAGAAAACAAATACGACGGAGTTGACAGTTTTCTTTCCGACTTTCCTGAAAATTTAGAGGCTAGAAACATTCCTGCTATTTATGGAGTAACCAATAAAGAATTTCTAACATTACATGCTTATGTGACCCCAGAAGACTACGAGGTGACAGGAATTCGAACTTTTCTGGAACGGGCTTTCAACTTGACTGATAACGAGATGAAAGACCACGTGAGACATTTCTACATCGGAGACGAGACGCTGACCGAGGAGTTTTTCGATGAGTTTATAGATTTTGCGTCGGACTATTACTTCAACTACGCCGTCCAACGGTCTATAAAGAAGTCATTGGCCGACGGTAACAAGGAGGTATATTACTACGTGTTCTCGTACGACGGAGGCAGGAATGCCATGAAGGAGTACCTCGGCATAACGGCGGAGGGCGCTGCGCACGCGGACGAGCTCGGCTACCTGCTGGCCGTGGATGCGGTCCCGGGACAACACATCGCCGAGGAGGACCAACTGATCATCGATAGGATCACTACTCTTTGGGCTAATTTTGCTAAATACGGCAACCCCACCCCTGAGCCGACGGACCTGCTGCCGGTCGTGTGGTCGACAGTAGAAGGTAACAAGCGGCCGTATCTGGACATCGATACCGACCTGCAGCTCAGAAGCAGGCCCTTCCACTACCGGATGGCCTTCTGGGATCTCTTGTATAAGCTCTATGGAGAATTGGAGCGCAAGAACTAA
ORF
Protein
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF07859.8 | alpha/beta hydrolase fold | |
| Pfam/Hmmer3 | PF12695.2 | Alpha/beta hydrolase family | |
| Pfam/Hmmer3 | PF02230.11 | Phospholipase/Carboxylesterase | |
| Pfam/Hmmer3 | PF00135.23 | Carboxylesterase family | |
| Pfam/Hmmer3 | PF00326.16 | Prolyl oligopeptidase family | |
| BLASTP/NCBI-nr | ADF43469 | carboxyl/choline esterase CCE006a [Helicoverpa armigera] | 1e-174 |
| InterPro | IPR019826 | Carboxylesterase_B_AS | |
| InterPro | IPR002018 | CarbesteraseB |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|---|---|---|
| Gene05875 | BMgn002796 | chr10 | 16987845 | 16989884 | Bm_scaf30 | 2213491 | 2215530 | - |
| Gene05895 | BMgn002901 | chr10 | 17279881 | 17282419 | Bm_scaf30 | 1920956 | 1923494 | + |
| Gene05893 | BMgn015690 | chr10 | 17258943 | 17268214 | Bm_scaf30 | 1935161 | 1944432 | + |
| Gene05897 | BMgn002899 | chr10 | 17344804 | 17347495 | Bm_scaf30 | 1855880 | 1858571 | + |
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|