KAIKObase gene description page [BMgn003957/Gene10377]
Outline
| Official gene ID | BMgn003957 |
|---|---|
| Local gene ID | Gene10377 |
| Chromosome | chr17 |
| Start (Chr.) | 17647972 |
| End (Chr.) | 17658669 |
| Scaffold | Bm_scaf105 |
| Start (Scaf.) | 448658 |
| End (Scaf.) | 459355 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001102464.2 | publicly available mRNA | No |
| AK386898 | full-length cDNA | Yes |
| BGIBMGA003957 | predicted gene | No |
Representative sequence
Nucleotide
GTCAAGGTGGACTCCCATACCAATGAGGAAAATCAGTTCTATCTTATGGGTAGGGACATGGCGGATTTTGGATTCCGAAAGATTATGGTATTTCTCGGTTACTCTTCGTTCCCGAAATTAATGAAGAAATTCAACGCCAAACTTCTGTCTGATGAGACTGGACATTTCTTCACCGATTTAGTTCTCAGAACGATGGAAGACCGTGAGGTTAAAGAAATTGTGAGACCTGATATGATTCATTTACTGATGGAGGCAAAACAAGGCAAACTTTCTTATGATGAAAAAAGTACTAAAGAGGCTGACACTGGATTTGCAACAGTCGAAGAATCCGATGTCGGAAAAAAGACTATCAATAGAATCTGGTCCAACACCGATTTGATTGCCCAAGCAACCCTCTTCTTCGTGGCTGGCTTTGAGACTATTTCGTCGGCGATGTCGTTTGCACTTCACGAGTTGGCTCTAAACCCTGAAATTCAGGACCGTCTGGTGCAAGAGATCAAGGAAAACTACGCGAAGACTGGGGGGAAATTCGATTTTAACTGTATTCAAGATTTGACTTACATGGATATGTTTGTGTCGGAGGTACTTAGATTGTGGACTCCGGTAGTCGGCATGGATCGTCTCTGCGTCAAAGATTACAATCTGGGAAGAGCGAACAAAAACGCCACTAAAGACTTTATCCTCCGCAAAGGCGAAGGATTGTCTATCCCGACCTGGTCAATCCATCACAATCCTGAATACTACCCCGAACCCTATAAATTTGACCCAGAGCGCTTCTCCGAGGAAAACAAACGGAACATCAAACCGTTCACTTATCTACCATTCGGGACGGGTCCGAGGAATTGTATCGGTTCAAGGTTTGCTCTTTGCGAGGTGAAAGTCATGTTATACCAGCTCCTGCAGCAGATCGAAGTTCTTCCGAGCGACAAGACTAAGGTTCGAGCGAAATTGGCGAAGGATACCTTCAACGTCAAGATCGAAGGAGGCCACTGGATCAGACTCAAGCTTAGGGATTAGATTTTCAAATAAATTGTTTTTACTGTTGTTTAAAAAAAAAAAAAAAAAAA
ORF
ATGGGTAGGGACATGGCGGATTTTGGATTCCGAAAGATTATGGTATTTCTCGGTTACTCTTCGTTCCCGAAATTAATGAAGAAATTCAACGCCAAACTTCTGTCTGATGAGACTGGACATTTCTTCACCGATTTAGTTCTCAGAACGATGGAAGACCGTGAGGTTAAAGAAATTGTGAGACCTGATATGATTCATTTACTGATGGAGGCAAAACAAGGCAAACTTTCTTATGATGAAAAAAGTACTAAAGAGGCTGACACTGGATTTGCAACAGTCGAAGAATCCGATGTCGGAAAAAAGACTATCAATAGAATCTGGTCCAACACCGATTTGATTGCCCAAGCAACCCTCTTCTTCGTGGCTGGCTTTGAGACTATTTCGTCGGCGATGTCGTTTGCACTTCACGAGTTGGCTCTAAACCCTGAAATTCAGGACCGTCTGGTGCAAGAGATCAAGGAAAACTACGCGAAGACTGGGGGGAAATTCGATTTTAACTGTATTCAAGATTTGACTTACATGGATATGTTTGTGTCGGAGGTACTTAGATTGTGGACTCCGGTAGTCGGCATGGATCGTCTCTGCGTCAAAGATTACAATCTGGGAAGAGCGAACAAAAACGCCACTAAAGACTTTATCCTCCGCAAAGGCGAAGGATTGTCTATCCCGACCTGGTCAATCCATCACAATCCTGAATACTACCCCGAACCCTATAAATTTGACCCAGAGCGCTTCTCCGAGGAAAACAAACGGAACATCAAACCGTTCACTTATCTACCATTCGGGACGGGTCCGAGGAATTGTATCGGTTCAAGGTTTGCTCTTTGCGAGGTGAAAGTCATGTTATACCAGCTCCTGCAGCAGATCGAAGTTCTTCCGAGCGACAAGACTAAGGTTCGAGCGAAATTGGCGAAGGATACCTTCAACGTCAAGATCGAAGGAGGCCACTGGATCAGACTCAAGCTTAGGGATTAG
Protein
MGRDMADFGFRKIMVFLGYSSFPKLMKKFNAKLLSDETGHFFTDLVLRTMEDREVKEIVRPDMIHLLMEAKQGKLSYDEKSTKEADTGFATVEESDVGKKTINRIWSNTDLIAQATLFFVAGFETISSAMSFALHELALNPEIQDRLVQEIKENYAKTGGKFDFNCIQDLTYMDMFVSEVLRLWTPVVGMDRLCVKDYNLGRANKNATKDFILRKGEGLSIPTWSIHHNPEYYPEPYKFDPERFSEENKRNIKPFTYLPFGTGPRNCIGSRFALCEVKVMLYQLLQQIEVLPSDKTKVRAKLAKDTFNVKIEGGHWIRLKLRD*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF00067.17 | Cytochrome P450 | |
| BLASTP/NCBI-nr | NP_001095934 | cytochrome P450 CYP9A22 precursor [Bombyx mori] gb|ABQ08706.1| cytochrome P450 CYP9A22 [Bombyx mori] gb|ABQ08708.2| cytochrome P450 CYP9A22 [Bombyx mandarina] | 0.0 |
| InterPro | IPR001128 | Cyt_P450 | |
| InterPro | IPR017972 | Cyt_P450_CS | |
| InterPro | IPR002401 | Cyt_P450_E_grp-I | |
| Gene Ontology(MF) | GO:0009055 | electron carrier activity | |
| Gene Ontology(MF) | GO:0020037 | heme binding | |
| Gene Ontology(MF) | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| Gene Ontology(MF) | GO:0005506 | iron ion binding | |
| Gene Ontology(BP) | GO:0055114 | oxidation-reduction process |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|