KAIKObase gene description page [BMgn004147/Gene11378]
Outline
| Official gene ID | BMgn004147 |
|---|---|
| Local gene ID | Gene11378 |
| Chromosome | chr19 |
| Start (Chr.) | 14207891 |
| End (Chr.) | 14214273 |
| Scaffold | Bm_scaf60 |
| Start (Scaf.) | 2298982 |
| End (Scaf.) | 2305364 |
| Direction | - |
Member sequences
| ID | Type | Representative |
|---|---|---|
| AK378398 | full-length cDNA | Yes |
| BGIBMGA004147 | predicted gene | No |
Representative sequence
Nucleotide
TAAATGAATTGGTTTATTTGTTCTATATTAAAATTCATTATATAATTGCAGCTTTGGTGTCGATTCCTCTAGTAGTTCCTGCGCTAATTATTTTATAATTTTATATTTTGATTATATCTTGTCGTAATTTCATCGGGACTATGTTTTAAGTTTAGAGGTATATATGTGTAGTTTTTTAGCATTATTAACATTTAATACACATCTAACAGTCTTTAGTTGCCATCACTCGACCTTTAAAACAACGTTTGACACTAGGTCTATGATGTCGACTGAGGTCTTCGCCTTACTGTAACACTATGAACAAAATTGAAGAAGTGAGTGAGTGAAGCATCAGTTGTAATTGCTTTGAGTAATGTATTTTTAAAAGGGAAGGTATATGAAGACTTCACAGTACATGTATGAGAGGACAGTGCTGTATTGTGAACAGAAATATAGTGTGTGTGATGTGTGTGCGAGCGAAGTGGTTAGTGCTGTGGTCGCTGTGGGCGGCGCGGCTGGTGCGTCAGCCCACAGCCACAGTACGGGTCAGCAACGGACTACTGCGGGGCGCCGTCGCACACGATGGATCATACGTACAATACAACGGAATACCATTTGGGAGTGTTACCGATGAAACTAAGTTCCAAGCACCTGGTCCAGAGCCGAAGTGGGATGGTATCTATGATGCAATTCACGAGGAAATCAGATGCAACCAGCAGTTTTCTACCAACCTGACTATAGGACGACGGGATTGTTTGACCCTGAACATATATACTCCATTTAATACCGACCCTGGAGATAAGCTCGTTGTAATGTTTTTTATTCATGGTGGAGGATTCTTTCAAGGGTCTGGATCTTCATTTTTTTATGGACCAAGATATCTGGTATCTAAAGGAGTGATTTTAGTAACTATCAACTACAGACTTAATATACAAGGATTTCTTTGTTTGGGAATTAAAGAGGCACCAGGAAATGCAGCTTTGAAAGATATGGTGGCTGCTTTGAAATGGGTGCAGAGAAATATAGCCAGCTTCGGCGGGGATCCTGATAACGTAACGATATTCGGAGAAAGCGCTGGGGCAGCATCAGTTTCGTTTTTGGTCTTGTCTCCGATGGCCAAAGGGTTGTTTCACAAAGCTATCACACAAAGTGGATCTTCGTTAGCACCGTTCGGCTTACAGTTCAAACCGATTTTCCTAGCTAGTTTACTAGCTAAAGTTATGGGGTTTATAAGTCAAGATCCCGTTAAATTGTACGAATATTTCATGACGAAATCGGATGATGAATTAATATTGACAAGAGTGCCGAGAAAGGAGGGACATGTTATAATATCAGAAATCTTGTACACGCCGTGCGTAGAAAAAGTAATTGAAGGTGTCGAGCCGTTCTTGATACAATCACCACAGGAAGCGCTCTCAAAGGGAGAGTTTAATAAAGTACCGATGATTATAGGCTCTAATACTCAAGAAGGGATCATGATCTTAGAAATGGACAATAGCACGATGCGAAACAATATCAAAATCGAGAAGTCACTACCAAAGAACTTGAATATAACTTCGCAAGAGGCGGTTACTGAAATCGTCGGGAATTTTAAGAAGATATACATGGGAGATGGTGACAGCTTTGGAGATTTAGTGAGTTTATCAAAATGGTATGGGGAGCCCTACCTCAACTATCCTTCTTTAGAAGAAACAGAGTTGATACTGAAGAGTAGTAAGCAACCGATTTACAATTATTTGTTTAATTATTCCGGCTGGCGGAACCTACCGAAGTTAGGTGGTGGGTCTGCGTACAAAGATGTCCCGGGAGCTACACATGCCGATGATTTATTCTATATGTTTTCTCAAGAATGGTTGTCTGGATTTTTTGAAAACAAAATGATAGAAAGAATGACTACTTTGTGGACGAACTTTGCGAAATACGGCGATCCAACTCCTGAAGCGACTGATCTTCTCCCAGTCAAGTGGTATCCAACTAATTTGACTACACCGATGAATTTCGTTCTGGACGAAGCGTTCTCGACAGTTCCACTCTGGTACAACGACGCTATGAAGTATTGGAAACAAGTGTATCAGAAATACCGAAGAAGATACGTTCAGGAGAATATTGGTTAGGTTACGCCTTGATAGAGCGGTGTGGGAAGCAAAGTATAAGGGATGATCTACCAAGATTCTGGTGATCTGCTTCAAAATATAGTAATGGAATTCGTACAACGGGAGACTATTTGGGTTTCAATAGCATTACAATTACGTCCATGAGCGACGGTAACCACTTACCATCAGGTGGGCCGTGTGCTCGTCTGCCTACAAAACCAATAAATAAATTATTACGAGCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ORF
ATGAGAGGACAGTGCTGTATTGTGAACAGAAATATAGTGTGTGTGATGTGTGTGCGAGCGAAGTGGTTAGTGCTGTGGTCGCTGTGGGCGGCGCGGCTGGTGCGTCAGCCCACAGCCACAGTACGGGTCAGCAACGGACTACTGCGGGGCGCCGTCGCACACGATGGATCATACGTACAATACAACGGAATACCATTTGGGAGTGTTACCGATGAAACTAAGTTCCAAGCACCTGGTCCAGAGCCGAAGTGGGATGGTATCTATGATGCAATTCACGAGGAAATCAGATGCAACCAGCAGTTTTCTACCAACCTGACTATAGGACGACGGGATTGTTTGACCCTGAACATATATACTCCATTTAATACCGACCCTGGAGATAAGCTCGTTGTAATGTTTTTTATTCATGGTGGAGGATTCTTTCAAGGGTCTGGATCTTCATTTTTTTATGGACCAAGATATCTGGTATCTAAAGGAGTGATTTTAGTAACTATCAACTACAGACTTAATATACAAGGATTTCTTTGTTTGGGAATTAAAGAGGCACCAGGAAATGCAGCTTTGAAAGATATGGTGGCTGCTTTGAAATGGGTGCAGAGAAATATAGCCAGCTTCGGCGGGGATCCTGATAACGTAACGATATTCGGAGAAAGCGCTGGGGCAGCATCAGTTTCGTTTTTGGTCTTGTCTCCGATGGCCAAAGGGTTGTTTCACAAAGCTATCACACAAAGTGGATCTTCGTTAGCACCGTTCGGCTTACAGTTCAAACCGATTTTCCTAGCTAGTTTACTAGCTAAAGTTATGGGGTTTATAAGTCAAGATCCCGTTAAATTGTACGAATATTTCATGACGAAATCGGATGATGAATTAATATTGACAAGAGTGCCGAGAAAGGAGGGACATGTTATAATATCAGAAATCTTGTACACGCCGTGCGTAGAAAAAGTAATTGAAGGTGTCGAGCCGTTCTTGATACAATCACCACAGGAAGCGCTCTCAAAGGGAGAGTTTAATAAAGTACCGATGATTATAGGCTCTAATACTCAAGAAGGGATCATGATCTTAGAAATGGACAATAGCACGATGCGAAACAATATCAAAATCGAGAAGTCACTACCAAAGAACTTGAATATAACTTCGCAAGAGGCGGTTACTGAAATCGTCGGGAATTTTAAGAAGATATACATGGGAGATGGTGACAGCTTTGGAGATTTAGTGAGTTTATCAAAATGGTATGGGGAGCCCTACCTCAACTATCCTTCTTTAGAAGAAACAGAGTTGATACTGAAGAGTAGTAAGCAACCGATTTACAATTATTTGTTTAATTATTCCGGCTGGCGGAACCTACCGAAGTTAGGTGGTGGGTCTGCGTACAAAGATGTCCCGGGAGCTACACATGCCGATGATTTATTCTATATGTTTTCTCAAGAATGGTTGTCTGGATTTTTTGAAAACAAAATGATAGAAAGAATGACTACTTTGTGGACGAACTTTGCGAAATACGGCGATCCAACTCCTGAAGCGACTGATCTTCTCCCAGTCAAGTGGTATCCAACTAATTTGACTACACCGATGAATTTCGTTCTGGACGAAGCGTTCTCGACAGTTCCACTCTGGTACAACGACGCTATGAAGTATTGGAAACAAGTGTATCAGAAATACCGAAGAAGATACGTTCAGGAGAATATTGGTTAG
Protein
MRGQCCIVNRNIVCVMCVRAKWLVLWSLWAARLVRQPTATVRVSNGLLRGAVAHDGSYVQYNGIPFGSVTDETKFQAPGPEPKWDGIYDAIHEEIRCNQQFSTNLTIGRRDCLTLNIYTPFNTDPGDKLVVMFFIHGGGFFQGSGSSFFYGPRYLVSKGVILVTINYRLNIQGFLCLGIKEAPGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPMAKGLFHKAITQSGSSLAPFGLQFKPIFLASLLAKVMGFISQDPVKLYEYFMTKSDDELILTRVPRKEGHVIISEILYTPCVEKVIEGVEPFLIQSPQEALSKGEFNKVPMIIGSNTQEGIMILEMDNSTMRNNIKIEKSLPKNLNITSQEAVTEIVGNFKKIYMGDGDSFGDLVSLSKWYGEPYLNYPSLEETELILKSSKQPIYNYLFNYSGWRNLPKLGGGSAYKDVPGATHADDLFYMFSQEWLSGFFENKMIERMTTLWTNFAKYGDPTPEATDLLPVKWYPTNLTTPMNFVLDEAFSTVPLWYNDAMKYWKQVYQKYRRRYVQENIG*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF07859.8 | alpha/beta hydrolase fold | |
| Pfam/Hmmer3 | PF12695.2 | Alpha/beta hydrolase family | |
| Pfam/Hmmer3 | PF00135.23 | Carboxylesterase family | |
| Pfam/Hmmer3 | PF00326.16 | Prolyl oligopeptidase family | |
| BLASTP/NCBI-nr | ACV60244 | antennal esterase CXE17 [Spodoptera littoralis] | 0.0 |
| InterPro | IPR019826 | Carboxylesterase_B_AS | |
| InterPro | IPR002018 | CarbesteraseB | |
| InterPro | IPR002168 | Lipase_GDXG_AS | |
| Gene Ontology(MF) | GO:0016787 | hydrolase activity | |
| Gene Ontology(BP) | GO:0008152 | metabolic process |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| H. melpomene | HMEL003534 | HE669205 | 3895 | 7796 | + |
| H. melpomene | HMEL003535 | HE669205 | 14300 | 21495 | - |
| M. sexta | Msex017263-RA | scaffold07875 | 1 | 945 | - |
| P. xylostella | Px006881.1 | scaffold_242 | 327803 | 329697 | - |