KAIKObase gene description page [BMgn006456/Gene03331]
Outline
| Official gene ID | BMgn006456 |
|---|---|
| Local gene ID | Gene03331 |
| Chromosome | chr6 |
| Start (Chr.) | 4608855 |
| End (Chr.) | 4618895 |
| Scaffold | Bm_scaf11 |
| Start (Scaf.) | 908925 |
| End (Scaf.) | 918965 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001046946.1 | publicly available mRNA | Yes |
| BGIBMGA006456 | predicted gene | No |
Representative sequence
Nucleotide
CGAATCGATGATTTGGCACTGGTCCTGTGTTGTTGTTCTGCTGACTTGGTCAGCTCCCGCTACAGCTGTTGTCGGAGGTGCGCCGGCGTCACCTCCGGAACCCGATGCAGCTGTAGTTTTCATCCAGCGACATGGCAGAAGCGCGAGGCTAGAGGGTCTCAAAGACGACAAACTCGGTTACTACACTTTCTTTGGGATAAGATATGCTGAGCCACCGCTAGGACCACGAAGGTTCCAACGGCCAGTGAGGCAGTATTTAGCAAGTGAGCTGAACGCCACGAGACAATGCTTACCGTGTCCGCAACGAGACCCTTACTATCCCGACCGATTTATGGGTCACGAAGATGGTTTGTGTCTCAATGTATTCGCTCCCAAAATGCCTGGCGATGAACGAGGTTGCCCAGTAGTCTTCTTTGTCCACGGAGGCAACTATAAAAGCGGTTCTGCGTCTGCGTATGGAGGCCAACATCTTACTCAAAAAGATACTATATTGGTGACGGCGCAGTATCGCTTAGGATCTTTAGGATACCTTAGTACTGATGAAAGAGATGCAGCTGGAAACGTTGGTTTGTTTGACCTACATGCTGTAATGGCCTGGATTCAAGACTATATAACGTTTTTTGGTGGTGATCCAACTCGAGTTGTTGTAATGGGCCAAGGTTCGGGTGGGAGCGCTGCATCACTTTTAGCAATGTCAGCGGAAGGACGTACCGCGACTGGTGTCGCTGCGTTATCAGGTGCTCCTCTATCACCAGGGGCAGTTAGACCTGAACCAGCTAAACACGCCGATACCATAGCAGAACGTACTGGATGCCCAAAGAGACCTGCAGAGAGTCTTATTAAGTGCCTTCGACAGGTACCCGTGGAAAAACTAATTATGGCCGATGAAGACTTAAGCATGGATAACGCTATGGACACAATGAAGTTTTTGGATGAAATATCTGGACGCTCAGGTGCTGGAGCTCGCGTAGAAGGTGAGGATGACAAACGAGCCTTGCCACCAATTGTATCGGAGAAACCGGCTGATTCTTTAAAAAAGAAAACGAAAAGACCTCCTATGTTGACAGGTGTCACTTCTGCAGAGACATCCAGAGCCGTTTTCGGAAAATACAACAAGTTTCTAACTAACCAATTACAGGCCGTTAAGGACTTCATTAAAAAAGACTTGGTCGGTGGTCTACAAGGTGTTGTGCAAGGCGTCGATGGTCTACTGCCTATAACGGCAGTGGTCGGATCTATACTTCCTATATCATTGACGGATTACTATGGATCGGTCTTCAATACAACTTTAAACGCAGTCGATGGTCTATCTCAAATAGTTGAAGCCACAGGTGATGCTTTGTTCAACTTTCCTGCGTACCAGAGTGTTCGCCAGTGGAGCGCAGGGGGTCCCGCTTATCTATATAGCTTTGAATACGTTGGGAACCTTAGTAAAGGGTCATATTTTCTACCTGGACTTGCCCTTACTGATAACTCAAATGATATGAAAGTATATGAAAACAAAATGAAGGGCCCAGCTCACGGAGATGAGCTTGCCTACATATTCGAACCGTTGGACAACGAAGGAAAATCAATGAGTGGTGCAGTATCCGACAGTGATGCTAAAGTTAGGGACAACTTTGTAGATCTCATTTCCAAATTCGCGCACAGCCTTAATGGAGAAGAGAACAATACAAAGACGAATTTGATGGGCTTGCAACCGTATTCAGAAGAAAATGATCAGTTCTTAAAAATCAATGATGGCATCAAAACAGATAAAGGGTTTAGGTTTTGCCAGATGGGCTTATGGGGTGGAATGGCGGATAGACTAACAGGAGCTCTCTGCAAAAATTTAATTGGGGATTTGTTATCCAAATTGCCGATACCCTTGCCAGTGGACAAGTTGCCGGTAGATAATCCTTTGAACAATTTGGGATTAGGCAATCTCGGAGGAAACAAACTACCATTAAACAACCTTGGGGGAAATAAAAACATGCTGGTGCCAGGTCTGCTCGGCAGGAAGCCTACAGAGCCGCCGAGGGTCCAACAAGTAACCAGGAGGACAACGCGAGGCTCTCTCTTGGGACTTCCTATAGACTTTTAAGTTCATTACCTCTGCAATAATTAACATGTTATGTAAATTGTTTGCCTGATAGGACTATAAATTAATTAAAAAACAAAAATTAATATGGTCT
ORF
ATGATTTGGCACTGGTCCTGTGTTGTTGTTCTGCTGACTTGGTCAGCTCCCGCTACAGCTGTTGTCGGAGGTGCGCCGGCGTCACCTCCGGAACCCGATGCAGCTGTAGTTTTCATCCAGCGACATGGCAGAAGCGCGAGGCTAGAGGGTCTCAAAGACGACAAACTCGGTTACTACACTTTCTTTGGGATAAGATATGCTGAGCCACCGCTAGGACCACGAAGGTTCCAACGGCCAGTGAGGCAGTATTTAGCAAGTGAGCTGAACGCCACGAGACAATGCTTACCGTGTCCGCAACGAGACCCTTACTATCCCGACCGATTTATGGGTCACGAAGATGGTTTGTGTCTCAATGTATTCGCTCCCAAAATGCCTGGCGATGAACGAGGTTGCCCAGTAGTCTTCTTTGTCCACGGAGGCAACTATAAAAGCGGTTCTGCGTCTGCGTATGGAGGCCAACATCTTACTCAAAAAGATACTATATTGGTGACGGCGCAGTATCGCTTAGGATCTTTAGGATACCTTAGTACTGATGAAAGAGATGCAGCTGGAAACGTTGGTTTGTTTGACCTACATGCTGTAATGGCCTGGATTCAAGACTATATAACGTTTTTTGGTGGTGATCCAACTCGAGTTGTTGTAATGGGCCAAGGTTCGGGTGGGAGCGCTGCATCACTTTTAGCAATGTCAGCGGAAGGACGTACCGCGACTGGTGTCGCTGCGTTATCAGGTGCTCCTCTATCACCAGGGGCAGTTAGACCTGAACCAGCTAAACACGCCGATACCATAGCAGAACGTACTGGATGCCCAAAGAGACCTGCAGAGAGTCTTATTAAGTGCCTTCGACAGGTACCCGTGGAAAAACTAATTATGGCCGATGAAGACTTAAGCATGGATAACGCTATGGACACAATGAAGTTTTTGGATGAAATATCTGGACGCTCAGGTGCTGGAGCTCGCGTAGAAGGTGAGGATGACAAACGAGCCTTGCCACCAATTGTATCGGAGAAACCGGCTGATTCTTTAAAAAAGAAAACGAAAAGACCTCCTATGTTGACAGGTGTCACTTCTGCAGAGACATCCAGAGCCGTTTTCGGAAAATACAACAAGTTTCTAACTAACCAATTACAGGCCGTTAAGGACTTCATTAAAAAAGACTTGGTCGGTGGTCTACAAGGTGTTGTGCAAGGCGTCGATGGTCTACTGCCTATAACGGCAGTGGTCGGATCTATACTTCCTATATCATTGACGGATTACTATGGATCGGTCTTCAATACAACTTTAAACGCAGTCGATGGTCTATCTCAAATAGTTGAAGCCACAGGTGATGCTTTGTTCAACTTTCCTGCGTACCAGAGTGTTCGCCAGTGGAGCGCAGGGGGTCCCGCTTATCTATATAGCTTTGAATACGTTGGGAACCTTAGTAAAGGGTCATATTTTCTACCTGGACTTGCCCTTACTGATAACTCAAATGATATGAAAGTATATGAAAACAAAATGAAGGGCCCAGCTCACGGAGATGAGCTTGCCTACATATTCGAACCGTTGGACAACGAAGGAAAATCAATGAGTGGTGCAGTATCCGACAGTGATGCTAAAGTTAGGGACAACTTTGTAGATCTCATTTCCAAATTCGCGCACAGCCTTAATGGAGAAGAGAACAATACAAAGACGAATTTGATGGGCTTGCAACCGTATTCAGAAGAAAATGATCAGTTCTTAAAAATCAATGATGGCATCAAAACAGATAAAGGGTTTAGGTTTTGCCAGATGGGCTTATGGGGTGGAATGGCGGATAGACTAACAGGAGCTCTCTGCAAAAATTTAATTGGGGATTTGTTATCCAAATTGCCGATACCCTTGCCAGTGGACAAGTTGCCGGTAGATAATCCTTTGAACAATTTGGGATTAGGCAATCTCGGAGGAAACAAACTACCATTAAACAACCTTGGGGGAAATAAAAACATGCTGGTGCCAGGTCTGCTCGGCAGGAAGCCTACAGAGCCGCCGAGGGTCCAACAAGTAACCAGGAGGACAACGCGAGGCTCTCTCTTGGGACTTCCTATAGACTTTTAA
Protein
MIWHWSCVVVLLTWSAPATAVVGGAPASPPEPDAAVVFIQRHGRSARLEGLKDDKLGYYTFFGIRYAEPPLGPRRFQRPVRQYLASELNATRQCLPCPQRDPYYPDRFMGHEDGLCLNVFAPKMPGDERGCPVVFFVHGGNYKSGSASAYGGQHLTQKDTILVTAQYRLGSLGYLSTDERDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRVVVMGQGSGGSAASLLAMSAEGRTATGVAALSGAPLSPGAVRPEPAKHADTIAERTGCPKRPAESLIKCLRQVPVEKLIMADEDLSMDNAMDTMKFLDEISGRSGAGARVEGEDDKRALPPIVSEKPADSLKKKTKRPPMLTGVTSAETSRAVFGKYNKFLTNQLQAVKDFIKKDLVGGLQGVVQGVDGLLPITAVVGSILPISLTDYYGSVFNTTLNAVDGLSQIVEATGDALFNFPAYQSVRQWSAGGPAYLYSFEYVGNLSKGSYFLPGLALTDNSNDMKVYENKMKGPAHGDELAYIFEPLDNEGKSMSGAVSDSDAKVRDNFVDLISKFAHSLNGEENNTKTNLMGLQPYSEENDQFLKINDGIKTDKGFRFCQMGLWGGMADRLTGALCKNLIGDLLSKLPIPLPVDKLPVDNPLNNLGLGNLGGNKLPLNNLGGNKNMLVPGLLGRKPTEPPRVQQVTRRTTRGSLLGLPIDF*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF12695.2 | Alpha/beta hydrolase family | |
| Pfam/Hmmer3 | PF07859.8 | alpha/beta hydrolase fold | |
| Pfam/Hmmer3 | PF12697.2 | Alpha/beta hydrolase family | |
| Pfam/Hmmer3 | PF00135.23 | Carboxylesterase family | |
| BLASTP/NCBI-nr | NP_001040411 | carboxylesterase clade H, member 1 precursor [Bombyx mori] gb|ABF51336.1| carboxylesterase [Bombyx mori] | 0.0 |
| InterPro | IPR002018 | CarbesteraseB |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| D. plexippus | DPOGS208286 | DPSCF300079 | 343070 | 351073 | + |
| H. melpomene | HMEL002835 | HE668338 | 837 | 7275 | - |
| M. sexta | Msex001000-RA | scaffold00010 | 1303452 | 1314489 | + |