KAIKObase gene description page [BMgn006936/Gene05730]
Outline
| Official gene ID | BMgn006936 |
|---|---|
| Local gene ID | Gene05730 |
| Chromosome | chr10 |
| Start (Chr.) | 11512027 |
| End (Chr.) | 11519442 |
| Scaffold | Bm_scaf44 |
| Start (Scaf.) | 608833 |
| End (Scaf.) | 616248 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001112751.1 | publicly available mRNA | No |
| AK386751 | full-length cDNA | No |
| AK386387 | full-length cDNA | Yes |
| AK386770 | full-length cDNA | No |
| AK386926 | full-length cDNA | No |
| BGIBMGA006936 | predicted gene | No |
Representative sequence
Nucleotide
TGAGTCGATAGGCGTCACTGCACGTGACTGCTGGTGCGTCCGAATCTAATAGTTGTAGTTAACGTGGTGACGCTGCGCTCACTTCATACCGATTATTGGTCTCTACTACATTTGGCTTACTCGTTTTAACGATACCCAACTAATATCAACTGTATCTATCAAGTAATATGGACCTTTATTTTATTTGGCTGGTAACGTTCGTGGCTGGGTTTTGGATTTTCAAAAAAATAAAGGAATGGCAGAATTTGCCCCCCGGACCTTGGGGGTTACCTATCGTCGGTTATTTGCCTTTCATTGATCGCTATCATCCACATATCACCTTGACAAATTTGTCTAAAACATACGGAGCTATTTACGGTCTCAAAATGGGCAGCATATATGCTGTAGTGTTATCTGATCATAAACTTGTAAGAGATGCGTTCTCAAAAGACAGTTTTTCTGGACGAGCACCTCTTTACTTAACACATGGCCTTATGAATGGAAATGGAATTATTTGTGCCGAAGGCGGTTTGTGGAGGGACCAAAGGAAATTAATAACATCGTGGTTGAAAAGTTTTGGAATGAGTAAGCACAGTGTTTCCCGAGAAAAATTGGAAAAACGAATCGCTTCAGGAGTATACGAAATTTTGGAAAATATCGAAAAAACTTCTGATGCTGCCTTGGACCTTCCTCATATGCTGACGAATTCTTTAGGAAACGTTGTCAATGAGATAATATTCGGCTTTAAGTTTCCACCTGAAGATAAAACATGGCAATGGTTTCGTCAAATACAGGAGGAAGGATGCCATGAGATGGGAGTCGCAGGTGTTGTAAACTTCTTGCCCTTTATACGCCATGTTTCGCCATCAACACGAAAAACAATTGAAGTTCTAGTCCGTGGACAGGCACAGACGCATACTTTGTACGCAAGCATGATAGATAGACGAAGAAAAATGTTGGGCTTAGAGAAGCCTAAGGGAGCCGAATATGCTCCTCACGAAAACCTTTTAAAACTATATCCAAATGGCCATATCAAATGCATAAAATACAGCAAAGTCTCTCCGAACACCGAGCATTTCTTTGATCCCAATACTCTTATTCCGACTGAAGGAGATTGCATACTGGATAATTTTCTGTTGGAGCAAAAGAAACGATTTGAGAGTGGAGACCCAACGGCACTGTATATGAGAGATGAACAGTTACATTTTCTATTAGCGGATATGTTCGGTGCCGGACTGGATACGACATCGGTGACTTTGGCTTGGTTTTTGCTATACATGGCTTTGTTTCCAGAAGAACAGGAAGAAATACGTAAGGAAATCTTATCCGTATATCCATATGACGATGATGTTGATAGTTCAAGGTTACCTCTGCTTATGGCAGCAATCTGTGAAACTCAGAGGATTCGATCGATTGTTCCAGTGGGAATACCCCATGGTTGTATAGAGGACGCTTACTTGGGTAACTACAGAATCCCAAAAAATGCCATGGTGATCCCATTGCAGTGGGCTATTCACATGGATCCTAATGTTTGGGAAGAACCAGAAAAATTCAAACCGCGTAGATTTTTGGCTCAAGATGGTAGTCTACTTAAGCCTCAAGAATTCATTCCGTTTCAAACTGGTAAGCGGATGTGTCCGGGTGACGAACTGTCCCGTATGTTGTCGTGTGGCCTCGTAAGTAGACTATTCAGAAAGCAGCGTATTCGACTCGCATCAAAAATACCGACAGCAGAAGAGATGCGTGGAACCGTCGGTGTTACGTTGGCACCTCCTCCGGTGAAATACTATTGCGAACCAATTTAATGACTAAAATTTTATTTGAATTCGCTTTTTATTAAAGTAGCGTTCAATAACATTAGTTGTAGATCTTTATGTAACTTTTGTTTCACGGAATATACCTTTTATCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ORF
ATGGACCTTTATTTTATTTGGCTGGTAACGTTCGTGGCTGGGTTTTGGATTTTCAAAAAAATAAAGGAATGGCAGAATTTGCCCCCCGGACCTTGGGGGTTACCTATCGTCGGTTATTTGCCTTTCATTGATCGCTATCATCCACATATCACCTTGACAAATTTGTCTAAAACATACGGAGCTATTTACGGTCTCAAAATGGGCAGCATATATGCTGTAGTGTTATCTGATCATAAACTTGTAAGAGATGCGTTCTCAAAAGACAGTTTTTCTGGACGAGCACCTCTTTACTTAACACATGGCCTTATGAATGGAAATGGAATTATTTGTGCCGAAGGCGGTTTGTGGAGGGACCAAAGGAAATTAATAACATCGTGGTTGAAAAGTTTTGGAATGAGTAAGCACAGTGTTTCCCGAGAAAAATTGGAAAAACGAATCGCTTCAGGAGTATACGAAATTTTGGAAAATATCGAAAAAACTTCTGATGCTGCCTTGGACCTTCCTCATATGCTGACGAATTCTTTAGGAAACGTTGTCAATGAGATAATATTCGGCTTTAAGTTTCCACCTGAAGATAAAACATGGCAATGGTTTCGTCAAATACAGGAGGAAGGATGCCATGAGATGGGAGTCGCAGGTGTTGTAAACTTCTTGCCCTTTATACGCCATGTTTCGCCATCAACACGAAAAACAATTGAAGTTCTAGTCCGTGGACAGGCACAGACGCATACTTTGTACGCAAGCATGATAGATAGACGAAGAAAAATGTTGGGCTTAGAGAAGCCTAAGGGAGCCGAATATGCTCCTCACGAAAACCTTTTAAAACTATATCCAAATGGCCATATCAAATGCATAAAATACAGCAAAGTCTCTCCGAACACCGAGCATTTCTTTGATCCCAATACTCTTATTCCGACTGAAGGAGATTGCATACTGGATAATTTTCTGTTGGAGCAAAAGAAACGATTTGAGAGTGGAGACCCAACGGCACTGTATATGAGAGATGAACAGTTACATTTTCTATTAGCGGATATGTTCGGTGCCGGACTGGATACGACATCGGTGACTTTGGCTTGGTTTTTGCTATACATGGCTTTGTTTCCAGAAGAACAGGAAGAAATACGTAAGGAAATCTTATCCGTATATCCATATGACGATGATGTTGATAGTTCAAGGTTACCTCTGCTTATGGCAGCAATCTGTGAAACTCAGAGGATTCGATCGATTGTTCCAGTGGGAATACCCCATGGTTGTATAGAGGACGCTTACTTGGGTAACTACAGAATCCCAAAAAATGCCATGGTGATCCCATTGCAGTGGGCTATTCACATGGATCCTAATGTTTGGGAAGAACCAGAAAAATTCAAACCGCGTAGATTTTTGGCTCAAGATGGTAGTCTACTTAAGCCTCAAGAATTCATTCCGTTTCAAACTGGTAAGCGGATGTGTCCGGGTGACGAACTGTCCCGTATGTTGTCGTGTGGCCTCGTAAGTAGACTATTCAGAAAGCAGCGTATTCGACTCGCATCAAAAATACCGACAGCAGAAGAGATGCGTGGAACCGTCGGTGTTACGTTGGCACCTCCTCCGGTGAAATACTATTGCGAACCAATTTAA
Protein
MDLYFIWLVTFVAGFWIFKKIKEWQNLPPGPWGLPIVGYLPFIDRYHPHITLTNLSKTYGAIYGLKMGSIYAVVLSDHKLVRDAFSKDSFSGRAPLYLTHGLMNGNGIICAEGGLWRDQRKLITSWLKSFGMSKHSVSREKLEKRIASGVYEILENIEKTSDAALDLPHMLTNSLGNVVNEIIFGFKFPPEDKTWQWFRQIQEEGCHEMGVAGVVNFLPFIRHVSPSTRKTIEVLVRGQAQTHTLYASMIDRRRKMLGLEKPKGAEYAPHENLLKLYPNGHIKCIKYSKVSPNTEHFFDPNTLIPTEGDCILDNFLLEQKKRFESGDPTALYMRDEQLHFLLADMFGAGLDTTSVTLAWFLLYMALFPEEQEEIRKEILSVYPYDDDVDSSRLPLLMAAICETQRIRSIVPVGIPHGCIEDAYLGNYRIPKNAMVIPLQWAIHMDPNVWEEPEKFKPRRFLAQDGSLLKPQEFIPFQTGKRMCPGDELSRMLSCGLVSRLFRKQRIRLASKIPTAEEMRGTVGVTLAPPPVKYYCEPI*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF00067.17 | Cytochrome P450 | |
| BLASTP/NCBI-nr | BAD34476 | cytochrome P450 [Bombyx mori] | 0.0 |
| InterPro | IPR001128 | Cyt_P450 | |
| InterPro | IPR002401 | Cyt_P450_E_grp-I | |
| Gene Ontology(MF) | GO:0009055 | electron carrier activity | |
| Gene Ontology(MF) | GO:0020037 | heme binding | |
| Gene Ontology(MF) | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| Gene Ontology(MF) | GO:0005506 | iron ion binding | |
| Gene Ontology(BP) | GO:0055114 | oxidation-reduction process |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| D. plexippus | DPOGS213017 | DPSCF300024 | 142071 | 145156 | + |
| H. melpomene | HMEL005067 | HE669881 | 52970 | 58791 | - |
| M. sexta | Msex006425-RA | scaffold00104 | 641744 | 652433 | - |