KAIKObase gene description page [BMgn007792/Gene08868]
Outline
| Official gene ID | BMgn007792 |
|---|---|
| Local gene ID | Gene08868 |
| Chromosome | chr15 |
| Start (Chr.) | 8956687 |
| End (Chr.) | 8966706 |
| Scaffold | Bm_scaf3 |
| Start (Scaf.) | 987558 |
| End (Scaf.) | 997577 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| BGIBMGA007792 | predicted gene | Yes |
Representative sequence
Nucleotide
ATGAATAGTGATGGGAGAGCCGGAGAAAATTCTAGTGCTGAGAAGCGAAGGAAGCCCCATAAGCCGAACATTTTGTCTCGTATATTTCTATGGTGGATGTGCCCCGTACTCGTTAAAGGAAATCAAAGAGACATTGTCGAGGATGACCTCATAATTCCGAAAAAGTCATTTAATTCTGAAAATCAAGGAGAGTATTTAGAAAGGTATTGGCTCCAAGAATATGAAGCCGCGATAAAGGAGAAAAGGGAGCCGTCATTGTGGACAGCTTTACGAAAAGCTTACTGGTTGGGATACATGCCGGGAGCTATCTACTTGATAATCATATCTGTCTTCAGGATAATTCAGCCGCTAGTATTCGCCGAACTGCTTTCCTACTGGTCAGTAGAAGCAACTATAACTCGACTAGAAGCAAGCTATTATGCTCTAGCACTTTTAGGTATAAACTTCATTAATATGATGTGTCAACATCACAATTCATTGTTTGTAGCGCGCTTTGGACTCAAGGTTAAAGTGGCTTGCTCATCTTTAGTATATAGAAAGTTGTTGCGCATGGACCAAGTAGCCTTAGGAGATGTAAGCGGAGGGAAACTGGTGAACCTGTTATCTAATGATGTTGCTAGATTCGACTACGCATTCATGTTTTTGCACTACCTCTGGGTGGTTATTAAAATGTACGCATGGGAGAAACCGTTCCAAGCAATCGTCAAGGTGGCAAGAAACTTCGAAATGATAGCACTCAGGAAGTCTATATTCATTCGGAGTGTTTTCCTTGGTTTCATGCTGTTCACTGAAAGAAGTATAATATTTATAACATGTTTGACATTGTTACTTACGGATGAAAGAGAGGACGTCCAAATAACACCAAAATCTTATGGAGATGATAATAGATTGATTTTCAACAACAAGGCATCGCTTGGCCCTCAAAACGAAATTATCCCAAAGAAATATTTAGCCACCGATGGCCAACTTGCCTCAACATTAACGAATGAACCAGTGCTTCAAACTGACCCAGCCGTGTGTGACTATCCCATAGAATTATCTAAAGTAGACGCCACATGGTCGTCATCAACAGATACTTCAGAAATGACACTAAGGAATATTAGTCTCAGAATAGGCAGAGGCAAACTTTGTGCTATAATTGGACCTGTTGGATCAGGAAAGTCATCCATTTTGCAAGTTCTTCTGAAAGAACTGCCGGTTTGCGGTGGTAGCCTGAGAATAAATGGGAGGCTTTCCTACGCGTGTCAAGAGTCTTGGCTGTTCCCTGCTACTGTGAGAGAAAACATTTTGTTTGGTTTGCCGTACGAATCACAGAAATATCACGAGGTGTGTAAAGCTTGTTCGTTGCTTCCTGATTTCAAACAATTTCCGTACGGAGACCTCTCCTTAGTTGGAGAGCGAGGAGTATCCTTGTCAGGGGGACAGCGTGCCAGAATTAATCTCGCTAGGGCTGTTTACCGAGAGGCCGACATTTACTTGCTAGATGATCCTCTCTCAGCAGTGGACGCCAACGTTGGCAGGCAGCTGTTTGACGGCTGTATCAAAGGATATCTACGGGGTCGAACTTGTGTCCTTGTAACCCATCAAATCCACTATCTTAAAGCAGCTGACATTATTGTCATACTGAACGAGGGGGCAATTGAAAACGTTGGTAGCTACGATGATTTGGTCAAGACCGGAACAGAGTTTTCGAAGCTGTTGACTAATCAAGAAAGCAACGATAATGAGAATGGCCCGGAAAAGAATTTCTTACGGGCTATATCGAAAATATCTACTAAGAGTGTTGAAGATCCAGATAACGAGAAGGTACAAGTGGAGGAAGAAGAGAAACGTGCCAAAGGAAATTTGAAATTCTCTGTTTTATACAAGTATTTGTCTGCAGTGAAATCATGGTTTCTAGTATTTTTGATGGTAGCCACATTAGTTATCACACAAGGATGTGCGATGTTCATAGATTATTGGCTGAGTTTTTGGTAA
ORF
Protein
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF13555.1 | P-loop containing region of AAA domain | |
| Pfam/Hmmer3 | PF13207.1 | AAA domain | |
| Pfam/Hmmer3 | PF00664.18 | ABC transporter transmembrane region | |
| Pfam/Hmmer3 | PF00005.22 | ABC transporter | |
| Pfam/Hmmer3 | PF13238.1 | AAA domain | |
| Pfam/Hmmer3 | PF13476.1 | AAA domain | |
| Pfam/Hmmer3 | PF03308.11 | ArgK protein | |
| Pfam/Hmmer3 | PF03193.11 | Protein of unknown function, DUF258 | |
| Pfam/Hmmer3 | PF13401.1 | AAA domain | |
| Pfam/Hmmer3 | PF13191.1 | AAA ATPase domain | |
| Pfam/Hmmer3 | PF13304.1 | AAA domain | |
| BLASTP/NCBI-nr | BAK82126 | ABC transporter [Bombyx mori] | 0.0 |
| InterPro | IPR003593 | AAA+_ATPase | |
| InterPro | IPR003439 | ABC_transporter-like | |
| InterPro | IPR011527 | ABC_transptrTM_dom_typ1 | |
| InterPro | IPR017940 | ABC_transporter_type1 | |
| InterPro | IPR001140 | ABC_transptr_TM_dom | |
| InterPro | IPR017871 | ABC_transporter_CS | |
| Gene Ontology(BP) | GO:0006810 | transport | |
| Gene Ontology(BP) | GO:0055085 | transmembrane transport | |
| Gene Ontology(MF) | GO:0005524 | ATP binding | |
| Gene Ontology(MF) | GO:0000166 | nucleotide binding | |
| Gene Ontology(MF) | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | |
| Gene Ontology(CC) | GO:0016021 | integral to membrane | |
| Gene Ontology(MF) | GO:0017111 | nucleoside-triphosphatase activity | |
| Gene Ontology(MF) | GO:0016887 | ATPase activity |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|