KAIKObase gene description page [BMgn007869/Gene08718]
Outline
| Official gene ID | BMgn007869 |
|---|---|
| Local gene ID | Gene08718 |
| Chromosome | chr15 |
| Start (Chr.) | 5891514 |
| End (Chr.) | 5906012 |
| Scaffold | Bm_scaf3 |
| Start (Scaf.) | 4048252 |
| End (Scaf.) | 4062750 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| BGIBMGA007869 | predicted gene | Yes |
Representative sequence
Nucleotide
ATGTCGAAAAAGAAAGGAAACAAAAAAAATCAAGATTTAGATGACGATTTCGATGAAAAGCCTTCAGTCGTGAATGAAAAGACAGAACTAACCTCTAAAAATAAAGGAAAAGGCAAGAAGAAGAATAAAACTGGAGATTGTAGCGATAGCGACGAAGAGAACATAAAGAAAGTTCCAGTTTCAGACGAAGAGGACGTCCCGAAACCGGCTGCCAAAAAGTCACAAAAGAAAGGAAAGAGTAAAAAAAAGGGTGCTGATAGGTCAGATGATGAAGAGGATGATAACAAATCCATTATCAACAATACAACAAATGTTTCATCAAAGCCAGCTAAACTTGCAAAAAAGAAAAAAGGGAAAGGTAAGAAAGATGATGATTGGTCTTCGGAAGGCAGTGATGTAGATCTCAAAATGGCTTCAGATGAAGATGTTGCAAAGCCTGTTGGTAAGAAGAAAACTAAAAATAAAAAGAAAATTATAGAAGCTCAATCATCTGATGAGGATGATGACCATGATGACACAAAATCAGTTGTCAGCAATGTCTCAAGTAATGCTCCCAAGAAAGCCAATAAACATACTAAAGCCAAGGGTAAAAAGGATGACTTACCTGATGAAGACAGTGACAAAGAATTGAAAATTGAAGCTTCAGAAGATGATGAATTAGTCATACCTTTAGTAAAAAGTAAAGGAAAACATAAAAAGAAGAATAATATGGATGATATTGAGGCAGAGTTAAAGAAATTTGAAATAAAAGATCCAGAGCATGAAGAGAAATCGCTAAAGGGCAAAGATAAAAAGAAAAAGCGACAAGAAGATGAATCCATTGTTGAAGAAAAAGATGACGATAAGGTGACAGAATTGCCTTCAAAAGAAAAAGAAGATTCTGTAGAAAAGAAATTGAGCCACAAAGAAAAGAAGAAACTGAAGAAACAGCAGGAGTATGAGAAACAGATGGAATTGATGACAAAAAAAGGTGGTCAGGGGCACAGTGAACTTGATGCAAACTTCACGGTCAGTCAGGCACAGAAAACAGCTGGTCAAATGGCAGCCCTAGAAAACGCAGTAGACATAAAAGTCGAAAACTTCTCGATCAGTGCGAAAGGAAAAGATTTATTCTTGAACGCGAATCTCTTGATTGCCAACGGACGTCGATATGGTTTGGTCGGGCCTAATGGACACGGAAAAACAACTTTATTGAGGCATTTAGCACAACGCGCCTTCCCGCTCCCGCCCCATATAGACATACTGTTGTGCGAGCAAGAGGTGACGGCCAGTGATATGTCAGCTGTAGATACGCTCCTCGAATCTGATGTTAAGAGAACCGAATTACTAAAGGAATGCAAAGAGCTTGAAGCTGAAACAGAGAAAGGCAACCTCAGCAAACAGGATAGACTTAATGAGGTTTACGCAGAACTGAAAGCGATAGGAGCGGACGCGGCTGAGCCTCGAGCGCGCCGTATCCTCGCGGGTCTGGGCTTCAGCCGTGAGATGCAGGATCGACCCACCAAGAACTTCTCCGGTGGATGGAGAATGAGAGTTTCGCTCGCTAGAGCCCTGTACATAGAACCGACTCTGCTGTTACTAGACGAGCCTACGAACCATTTAGATCTGAACGCCGTGATCTGGTTAGACAATTACCTGCAAGGATGGAAGAAGACGTTACTAGTGGTATCTCACGATCAATCTTTCTTGGATAACGTTTGCAACGAAATCATACATTTAGATCAACAGAAATTGTTTTATTACAAAGGCAATTATTCGATGTTCAAGAAAATGTACGCACAGAAACGAAAGGAGATGATCAAGGAATATGAGAAACAAGAGAAGAGGATAAAGGAACTGAAGGCCCACGGACAGTCCAAGAAGCAAGCCGAAAAGAAGCAGAAGGATGCGTTGACGCGGAAACAGGAGAAGAACCGCAGCAAGGCGCAGCGCGAGGACGAGGACGGCGCCGCGCCCGTCGCCCTGCTGCAGCGGCCTAAGGAGTACATCGTCAAGTTCAGCTTCCCCGACCTGTCGCCGCTGCAGCCGCCCATCCTGGGACTGCACGACGTGGATTTCAACTTCCCCGGTCAGAAGCCTCTCTTCAAGGGCGTGAACTTCGGTATCGATCTTAATTCTCGTATCGCGATCGTGGGCCCCAACGGAGTCGGGAAATCGACGTTCCTGAAGCTACTCGTCGGCGAATTGACTCCTATACGCGGCGAACTGTTTAAGAACCACAGATTGAGGATAGGCAGATTCGACCAGCACTCTGGCGAGCACCTGACGGCGGAGGAGACGCCGGCGGAGTACCTGCAGCGCTTGTTCGGTCTGCAGTACGAGAAGGCGAGGAAGGCGCTCGGCACGTTCGGGCTGGCGAGCCACGCGCACATCATCAAGATGAAAGACCTCAGCGGCGGACAGAAGGCCCGCGTGGCGCTCGCCGAAATGACCCTCATGGGGCCCGACGTTATCATTCTGGATGAACCCACAAATAACTTGGACATCGAGAGTATAGACGCGTTGGCCGAAGCGATCAACGACTACAAGGGGGGCGTGGTCATAGTGTCCCACGACGAACGACTTATCAGAGAGACGGATTGCGCGCTCTACGTCATCGAAGATCAGACCATCAACGAGGTCGACGGTGACTTCGACGATTACCGTAAGGAGCTCCTCGAGAGCCTCGGGGAAACGGTCAACTCACCATCCATCATCGCTAACCAAGCAGTCCAACAATGA
ORF
Protein
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF13558.1 | Putative exonuclease SbcCD, C subunit | |
| Pfam/Hmmer3 | PF13207.1 | AAA domain | |
| Pfam/Hmmer3 | PF05729.7 | NACHT domain | |
| Pfam/Hmmer3 | PF03205.9 | Molybdopterin guanine dinucleotide synthesis protein B | |
| Pfam/Hmmer3 | PF08477.8 | Miro-like protein | |
| Pfam/Hmmer3 | PF07728.9 | AAA domain (dynein-related subfamily) | |
| Pfam/Hmmer3 | PF13481.1 | AAA domain | |
| Pfam/Hmmer3 | PF12846.2 | AAA-like domain | |
| Pfam/Hmmer3 | PF00910.17 | RNA helicase | |
| Pfam/Hmmer3 | PF13245.1 | Part of AAA domain | |
| Pfam/Hmmer3 | PF00350.18 | Dynamin family | |
| Pfam/Hmmer3 | PF13401.1 | AAA domain | |
| Pfam/Hmmer3 | PF13191.1 | AAA ATPase domain | |
| Pfam/Hmmer3 | PF13521.1 | AAA domain | |
| Pfam/Hmmer3 | PF13671.1 | AAA domain | |
| Pfam/Hmmer3 | PF13555.1 | P-loop containing region of AAA domain | |
| Pfam/Hmmer3 | PF12848.2 | ABC transporter | |
| Pfam/Hmmer3 | PF01926.18 | 50S ribosome-binding GTPase | |
| Pfam/Hmmer3 | PF00004.24 | ATPase family associated with various cellular activities (AAA) | |
| Pfam/Hmmer3 | PF00005.22 | ABC transporter | |
| Pfam/Hmmer3 | PF13238.1 | AAA domain | |
| Pfam/Hmmer3 | PF13476.1 | AAA domain | |
| Pfam/Hmmer3 | PF13173.1 | AAA domain | |
| Pfam/Hmmer3 | PF03193.11 | Protein of unknown function, DUF258 | |
| Pfam/Hmmer3 | PF13304.1 | AAA domain | |
| Pfam/Hmmer3 | PF03266.10 | NTPase | |
| BLASTP/NCBI-nr | XP_002010197 | GI15800 [Drosophila mojavensis] gb|EDW07514.1| GI15800 [Drosophila mojavensis] | 0.0 |
| InterPro | IPR003593 | AAA+_ATPase | |
| InterPro | IPR003439 | ABC_transporter-like | |
| InterPro | IPR017871 | ABC_transporter_CS | |
| Gene Ontology(MF) | GO:0005524 | ATP binding | |
| Gene Ontology(MF) | GO:0000166 | nucleotide binding | |
| Gene Ontology(MF) | GO:0017111 | nucleoside-triphosphatase activity | |
| Gene Ontology(MF) | GO:0016887 | ATPase activity |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| D. plexippus | DPOGS213110 | DPSCF300016 | 142910 | 154526 | + |
| H. melpomene | HMEL006544 | HE671970 | 31983 | 42028 | - |
| M. sexta | Msex015791-RA | scaffold01185 | 10188 | 18936 | - |
| P. xylostella | Px001241.1 | scaffold_115 | 254134 | 267193 | + |
| P. xylostella | Px006766.1 | scaffold_239 | 104170 | 121670 | - |