KAIKObase gene description page [BMgn008141/Gene13728]
Outline
| Official gene ID | BMgn008141 |
|---|---|
| Local gene ID | Gene13728 |
| Chromosome | chr24 |
| Start (Chr.) | 1179406 |
| End (Chr.) | 1183995 |
| Scaffold | Bm_scaf52 |
| Start (Scaf.) | 1179406 |
| End (Scaf.) | 1183995 |
| Direction | - |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001128313.1 | publicly available mRNA | Yes |
| BGIBMGA008141 | predicted gene | No |
Representative sequence
Nucleotide
ATTTTTTTTATTTCTCATCTACTACATCGAGGGTCCGGTGATTGGGAAAGACTTACAATCCGTTATCAGTAAAGGTTTGCCGACAGAAAAACCGTCATAAGATTTATCATCACATGATAATAAAAAATATCGCATCACTAGCGGTTCTCAGACATTTATCAGATACACTTCAACATGTCGGCTCGGAGACGTGTTCTTGTTGCTGTCCAAATTCTTTTATATTTGGTCAACGAAAGCCAAGGTTTGGCCAGAATTGACCCTCTGGTTGAGACCGAGCTGGGCCTGATCAAGGGTCTGAGGGCGAACGATGGGGACTACGCCATGTTCTTGGGTATACCCTTTGGAAAAGTCAACGCTAGCAATCCTTTTGGGGACGCAACGGCATATGGTAAATTTGATGGGGTATTAGAAGCTTACGATGATTCGGCGATATGCCCTCAAATTGACGAAGCCACTGGCGTCTACATTGGCACCATAGATTGTCTACATCTCAACGTATACGTTCCCCCTTCAGCGACATCAAAGAACCCTGTCCCGGTCATGGTTTACATCTACGGGGGCAGTTTCAGACATGGCGATTTCGGAAGACACGTCTATGGTCCCAAATTCTTGGTAAAGCACGACGTTATTTTGGTCACGTTGAATTACAGGCTTGGGCCGTACGGTTTCATGTGTCTGGACATCCCTGAGGTGCCGGGCAATCAGGGCTTCAAAGATCAGCTCCTAGCTTTGAAATGGGTCAAGGAGCACATCCATAATTTCGGGGGCGACAGCAACAAGATCACGGTTTCTGGCGAAAGCGCTGGTGCTATCGCTGTGGACTTCCACCTAATGTATAATAAAGAGAAGCTTTTCCATAAGGCCATCATACAGAGCGGGACAACACTGTCGCCAGTCTTTTACGAGCCTTCGAGAAACGCACCAATTTTGATAGCCGAAAAACTGGGGTACATCACCGACGATTTAAACGCTGCCATTACTTTCTTAGCCCAAGTAGACCCCAGTTTGGTCATAGCTGCCGTTTTCGATTTGGGCATCGAATTGAACGTAAGGCCATGCGTCGAAAAAAGCTTCGAAGGCGTCGAAAGATTTATTGACCAGAACTGGATCACCGCGGACGTACGTAACGCTAGGGATGTGCAAGCATTGATAGGTCTCAATGAGCACGAAAGACTCATTATACACGCGAGCGGCGATAACGATTACTTCAAAAATCTCAACGTTGTCGAGACCAAGCTATTCGACGCGTTCGACGTTGACAATGACAAGTTCAACGGAATGAAAGACATTGTACAGCACTTTTACTTCGGAGACGACGAGGTGACCATCGAATCAAAACTGGACGTGGTCAATTTCGATTCCGACATTATGTACAACCATCCTTCGTACAGAAGCATCGACAGATTCATTGAAAACAATTCGGGCGATATCTTCCTTTACCTGTTTTCTTATGTCGGAGGGAGGAATTATGTCAGGGTCAGAGATAACATTACCGTGGGAGGGGCCGTGCACGCTGACGAGTTGGGTTACCTGTTCGATATATCGTATCTGAACATCGAAACTGATGATGCTGACGTCAGAATGGTCGATGTGATGACGACCTTGTGGACTAATTTCGTTAAATACGGAAACCCTACGCCGGAAGTTACAGAACTAATACCGGTAAAATGGACTCCGATTGTTGATACTAAAACGAAACCTTTCCTAAACTTGGGCAAGGAGCTCACTGTGGGCTCCAGACCTTTTAGTGAGAGAATGGCCTTCTGGGATTTATTCTACAAGGCCAACAAGGAGCTGCAAAGGGCGTATCCCGGGGAAAACATCTGAGGATCGAGACAGAATACGAAATACGATTTATGCATTGAAATAAATGACAGAATAACATTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
ORF
ATGTCGGCTCGGAGACGTGTTCTTGTTGCTGTCCAAATTCTTTTATATTTGGTCAACGAAAGCCAAGGTTTGGCCAGAATTGACCCTCTGGTTGAGACCGAGCTGGGCCTGATCAAGGGTCTGAGGGCGAACGATGGGGACTACGCCATGTTCTTGGGTATACCCTTTGGAAAAGTCAACGCTAGCAATCCTTTTGGGGACGCAACGGCATATGGTAAATTTGATGGGGTATTAGAAGCTTACGATGATTCGGCGATATGCCCTCAAATTGACGAAGCCACTGGCGTCTACATTGGCACCATAGATTGTCTACATCTCAACGTATACGTTCCCCCTTCAGCGACATCAAAGAACCCTGTCCCGGTCATGGTTTACATCTACGGGGGCAGTTTCAGACATGGCGATTTCGGAAGACACGTCTATGGTCCCAAATTCTTGGTAAAGCACGACGTTATTTTGGTCACGTTGAATTACAGGCTTGGGCCGTACGGTTTCATGTGTCTGGACATCCCTGAGGTGCCGGGCAATCAGGGCTTCAAAGATCAGCTCCTAGCTTTGAAATGGGTCAAGGAGCACATCCATAATTTCGGGGGCGACAGCAACAAGATCACGGTTTCTGGCGAAAGCGCTGGTGCTATCGCTGTGGACTTCCACCTAATGTATAATAAAGAGAAGCTTTTCCATAAGGCCATCATACAGAGCGGGACAACACTGTCGCCAGTCTTTTACGAGCCTTCGAGAAACGCACCAATTTTGATAGCCGAAAAACTGGGGTACATCACCGACGATTTAAACGCTGCCATTACTTTCTTAGCCCAAGTAGACCCCAGTTTGGTCATAGCTGCCGTTTTCGATTTGGGCATCGAATTGAACGTAAGGCCATGCGTCGAAAAAAGCTTCGAAGGCGTCGAAAGATTTATTGACCAGAACTGGATCACCGCGGACGTACGTAACGCTAGGGATGTGCAAGCATTGATAGGTCTCAATGAGCACGAAAGACTCATTATACACGCGAGCGGCGATAACGATTACTTCAAAAATCTCAACGTTGTCGAGACCAAGCTATTCGACGCGTTCGACGTTGACAATGACAAGTTCAACGGAATGAAAGACATTGTACAGCACTTTTACTTCGGAGACGACGAGGTGACCATCGAATCAAAACTGGACGTGGTCAATTTCGATTCCGACATTATGTACAACCATCCTTCGTACAGAAGCATCGACAGATTCATTGAAAACAATTCGGGCGATATCTTCCTTTACCTGTTTTCTTATGTCGGAGGGAGGAATTATGTCAGGGTCAGAGATAACATTACCGTGGGAGGGGCCGTGCACGCTGACGAGTTGGGTTACCTGTTCGATATATCGTATCTGAACATCGAAACTGATGATGCTGACGTCAGAATGGTCGATGTGATGACGACCTTGTGGACTAATTTCGTTAAATACGGAAACCCTACGCCGGAAGTTACAGAACTAATACCGGTAAAATGGACTCCGATTGTTGATACTAAAACGAAACCTTTCCTAAACTTGGGCAAGGAGCTCACTGTGGGCTCCAGACCTTTTAGTGAGAGAATGGCCTTCTGGGATTTATTCTACAAGGCCAACAAGGAGCTGCAAAGGGCGTATCCCGGGGAAAACATCTGA
Protein
MSARRRVLVAVQILLYLVNESQGLARIDPLVETELGLIKGLRANDGDYAMFLGIPFGKVNASNPFGDATAYGKFDGVLEAYDDSAICPQIDEATGVYIGTIDCLHLNVYVPPSATSKNPVPVMVYIYGGSFRHGDFGRHVYGPKFLVKHDVILVTLNYRLGPYGFMCLDIPEVPGNQGFKDQLLALKWVKEHIHNFGGDSNKITVSGESAGAIAVDFHLMYNKEKLFHKAIIQSGTTLSPVFYEPSRNAPILIAEKLGYITDDLNAAITFLAQVDPSLVIAAVFDLGIELNVRPCVEKSFEGVERFIDQNWITADVRNARDVQALIGLNEHERLIIHASGDNDYFKNLNVVETKLFDAFDVDNDKFNGMKDIVQHFYFGDDEVTIESKLDVVNFDSDIMYNHPSYRSIDRFIENNSGDIFLYLFSYVGGRNYVRVRDNITVGGAVHADELGYLFDISYLNIETDDADVRMVDVMTTLWTNFVKYGNPTPEVTELIPVKWTPIVDTKTKPFLNLGKELTVGSRPFSERMAFWDLFYKANKELQRAYPGENI*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF07859.8 | alpha/beta hydrolase fold | |
| Pfam/Hmmer3 | PF00135.23 | Carboxylesterase family | |
| Pfam/Hmmer3 | PF00326.16 | Prolyl oligopeptidase family | |
| BLASTP/NCBI-nr | NP_001121785 | alpha-esterase 49 precursor [Bombyx mori] gb|ACD80422.1| carboxylesterase CarE-13 [Bombyx mori] | 0.0 |
| InterPro | IPR019826 | Carboxylesterase_B_AS | |
| InterPro | IPR002018 | CarbesteraseB |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|