KAIKObase gene description page [BMgn009544/Gene15890]
Outline
| Official gene ID | BMgn009544 |
|---|---|
| Local gene ID | Gene15890 |
| Chromosome | unknown |
| Start (Chr.) | ND |
| End (Chr.) | ND |
| Scaffold | Bm_scaf153 |
| Start (Scaf.) | 128529 |
| End (Scaf.) | 141895 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001127719.1 | publicly available mRNA | Yes |
| BGIBMGA009544 | predicted gene | No |
Representative sequence
Nucleotide
ACTTCGAACGAGTCTTTCGAGGAAAATGTCCCGTACATTCGCACTTTTAATTAACTCAGTGTTATTGTTTGCTGCTTATGGACAATGCCATGAGGGTCATGGCCACCACCATCACGATCAGAACGTCGGACACCAGCACGACCGTCCCTCGCCAAAGGTAACGTCAGCATCCGGAGTATTTCTCGGTTCCTGGATGCAGACCCGTCGCGGAAGACATTTCCAAGGCTTCCGCGGTATCAGATACGCTGAAGCTCCCGTTGGAGATCTAAGATTCCAGGCCCCAAAACCAATACTCCAATATTCAGGAGAAGTGGACGCCAGCAAGGAAGGCCCGGCCTGTCCGCAACCAACTAATCCGAACTATTACAACAATGTAGACGAGGACTGCCTTCGACTAAATGTCTACACTCACGGAAGCTCAGGAGAACTTCGTCCAGTAGTGATATTTATCCATGCCGGTGGATTCTACGCTGCGTCCGGTCGTAGCGACATCGCCGGTCCGGACTATTTCCTGGATAAAGACATTGTGCTGGTCACAATCAACTATCGTTTATCTTCTCTTGGTTTCTTGAGTACGGGTGACGAGCTCGCTCCCGGGAACAATGGATACAAAGACCAAGTAATGGCCATGCGCTGGGTACAGAGGAACATCGCGTCATTCGGCGGCGACCCTAACCTGGTCACGATAGCTGGTTACAGCGCCGGTTCATTCAGCGTCATGCTTCATACTGTCTCTCCTATGTCTAAAGGTCTCTTCCATCGTGCGATATCAATGAGCGGCTCCCCGATTTCTCAAGTGGTGATCCCACATGATCAACGCCAATTAGCCGTGAGGCAGGCCGAGTTACTCGACTGCCCTACCAACAGCTCGCGAGCTATTATTGATTGCCTCAAGACTAAGCCTTGGGGGGATATCGGGAATTCTCTGCGTGGATTCTTCGAATTCGCTTACGACCCGGTCCTGATCTGGGTTCCACTTGTAGAGAAGGATTGCGGACAAGAAAGGTTCCTCGTCAAGCAGCCTTTGGACTCGATACGTCAAAGAGAAATACATTCTGTTCCGTACATCATTAGTCAAACACAGGACGAGTTCTTTTGGAAAGCTTTGAATATCCTCGCTAACCAGACTCTGACAGACACAATGAATAACGAATGGGAACGGATAGCTCCAATTTCCTTCTACCTTCCTGCGAGTACATCACGCCAAGCTTCCAATAAACTGAAGCAAGCCTACCTTGGTGGGAAGAAATTGGTCAATGATACTGCCAGTGCTGATGGCCTAGGGAAGTTATATAATGACGCTATTATTGGGTTTGGGGTGCACAGATTGGTGAACCTCATGAGTCAATATTCATCCAAACCGGTCTATTACTACGAGTTTGCTTACATCGGAAACCACAGCCACTACGAAGATCCCGTCACCAAGAAACCTACTGGTGCAGCCCACCACGACGAGCTGATCTATTTGTTCAGTGTCAACGCTACCTTCCCGGTCATAGAAGCCTCTGACAGCCTCGACTCGAAGATGGTTGACAAAATGACTAGCATCTGGTACAACTTCCTTAAAAACGGAGATCCGAATCCCCGGGATAACAATCCTGAGTTATCAGGTCTGTCTTGGCCGGCTATGAAGCCCAACGACAGGAAATACCTTCGCATCGACAAGACTTTCTCGGTCCATGAAAACCTCTTCGAAGATAGGTTCAAGATCTGGGAAGAGCTGTACCCGATAACCAATTGATTTCAAATAGTGACGGATTTCCATAAATTTACAGGAATGAATTGGAAACTACTCAAATGGAGAACTTAAAATATAAAGTATAATAATAATAAAGTATTACATTTTTTTACTAAAAAAAAAAAAAAAAAA
ORF
ATGTCCCGTACATTCGCACTTTTAATTAACTCAGTGTTATTGTTTGCTGCTTATGGACAATGCCATGAGGGTCATGGCCACCACCATCACGATCAGAACGTCGGACACCAGCACGACCGTCCCTCGCCAAAGGTAACGTCAGCATCCGGAGTATTTCTCGGTTCCTGGATGCAGACCCGTCGCGGAAGACATTTCCAAGGCTTCCGCGGTATCAGATACGCTGAAGCTCCCGTTGGAGATCTAAGATTCCAGGCCCCAAAACCAATACTCCAATATTCAGGAGAAGTGGACGCCAGCAAGGAAGGCCCGGCCTGTCCGCAACCAACTAATCCGAACTATTACAACAATGTAGACGAGGACTGCCTTCGACTAAATGTCTACACTCACGGAAGCTCAGGAGAACTTCGTCCAGTAGTGATATTTATCCATGCCGGTGGATTCTACGCTGCGTCCGGTCGTAGCGACATCGCCGGTCCGGACTATTTCCTGGATAAAGACATTGTGCTGGTCACAATCAACTATCGTTTATCTTCTCTTGGTTTCTTGAGTACGGGTGACGAGCTCGCTCCCGGGAACAATGGATACAAAGACCAAGTAATGGCCATGCGCTGGGTACAGAGGAACATCGCGTCATTCGGCGGCGACCCTAACCTGGTCACGATAGCTGGTTACAGCGCCGGTTCATTCAGCGTCATGCTTCATACTGTCTCTCCTATGTCTAAAGGTCTCTTCCATCGTGCGATATCAATGAGCGGCTCCCCGATTTCTCAAGTGGTGATCCCACATGATCAACGCCAATTAGCCGTGAGGCAGGCCGAGTTACTCGACTGCCCTACCAACAGCTCGCGAGCTATTATTGATTGCCTCAAGACTAAGCCTTGGGGGGATATCGGGAATTCTCTGCGTGGATTCTTCGAATTCGCTTACGACCCGGTCCTGATCTGGGTTCCACTTGTAGAGAAGGATTGCGGACAAGAAAGGTTCCTCGTCAAGCAGCCTTTGGACTCGATACGTCAAAGAGAAATACATTCTGTTCCGTACATCATTAGTCAAACACAGGACGAGTTCTTTTGGAAAGCTTTGAATATCCTCGCTAACCAGACTCTGACAGACACAATGAATAACGAATGGGAACGGATAGCTCCAATTTCCTTCTACCTTCCTGCGAGTACATCACGCCAAGCTTCCAATAAACTGAAGCAAGCCTACCTTGGTGGGAAGAAATTGGTCAATGATACTGCCAGTGCTGATGGCCTAGGGAAGTTATATAATGACGCTATTATTGGGTTTGGGGTGCACAGATTGGTGAACCTCATGAGTCAATATTCATCCAAACCGGTCTATTACTACGAGTTTGCTTACATCGGAAACCACAGCCACTACGAAGATCCCGTCACCAAGAAACCTACTGGTGCAGCCCACCACGACGAGCTGATCTATTTGTTCAGTGTCAACGCTACCTTCCCGGTCATAGAAGCCTCTGACAGCCTCGACTCGAAGATGGTTGACAAAATGACTAGCATCTGGTACAACTTCCTTAAAAACGGAGATCCGAATCCCCGGGATAACAATCCTGAGTTATCAGGTCTGTCTTGGCCGGCTATGAAGCCCAACGACAGGAAATACCTTCGCATCGACAAGACTTTCTCGGTCCATGAAAACCTCTTCGAAGATAGGTTCAAGATCTGGGAAGAGCTGTACCCGATAACCAATTGA
Protein
MSRTFALLINSVLLFAAYGQCHEGHGHHHHDQNVGHQHDRPSPKVTSASGVFLGSWMQTRRGRHFQGFRGIRYAEAPVGDLRFQAPKPILQYSGEVDASKEGPACPQPTNPNYYNNVDEDCLRLNVYTHGSSGELRPVVIFIHAGGFYAASGRSDIAGPDYFLDKDIVLVTINYRLSSLGFLSTGDELAPGNNGYKDQVMAMRWVQRNIASFGGDPNLVTIAGYSAGSFSVMLHTVSPMSKGLFHRAISMSGSPISQVVIPHDQRQLAVRQAELLDCPTNSSRAIIDCLKTKPWGDIGNSLRGFFEFAYDPVLIWVPLVEKDCGQERFLVKQPLDSIRQREIHSVPYIISQTQDEFFWKALNILANQTLTDTMNNEWERIAPISFYLPASTSRQASNKLKQAYLGGKKLVNDTASADGLGKLYNDAIIGFGVHRLVNLMSQYSSKPVYYYEFAYIGNHSHYEDPVTKKPTGAAHHDELIYLFSVNATFPVIEASDSLDSKMVDKMTSIWYNFLKNGDPNPRDNNPELSGLSWPAMKPNDRKYLRIDKTFSVHENLFEDRFKIWEELYPITN*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF07859.8 | alpha/beta hydrolase fold | |
| Pfam/Hmmer3 | PF00135.23 | Carboxylesterase family | |
| Pfam/Hmmer3 | PF00326.16 | Prolyl oligopeptidase family | |
| BLASTP/NCBI-nr | NP_001121191 | integument esterase 2 precursor [Bombyx mori] gb|ACD03181.1| carboxylesterase CarE-12 [Bombyx mori] | 0.0 |
| InterPro | IPR019826 | Carboxylesterase_B_AS | |
| InterPro | IPR002018 | CarbesteraseB |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|---|---|---|
| Gene15713 | BMgn013812 | chr28 | 12169749 | 12181103 | Bm_scaf62 | 2098238 | 2109592 | - |
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| D. plexippus | DPOGS209311 | DPSCF300234 | 137363 | 143213 | - |
| D. plexippus | DPOGS211843 | DPSCF300011 | 1380758 | 1386627 | - |
| H. melpomene | HMEL005882 | HE670311 | 120995 | 138419 | + |
| M. sexta | Msex008677-RA | scaffold00188 | 8570 | 30034 | - |
| P. xylostella | Px004284.1 | scaffold_17 | 1618304 | 1633019 | + |