KAIKObase gene description page [BMgn010825/Gene14893]
Outline
| Official gene ID | BMgn010825 |
|---|---|
| Local gene ID | Gene14893 |
| Chromosome | chr26 |
| Start (Chr.) | 3343839 |
| End (Chr.) | 3351249 |
| Scaffold | Bm_scaf25 |
| Start (Scaf.) | 3343839 |
| End (Scaf.) | 3351249 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| BGIBMGA010825 | predicted gene | Yes |
Representative sequence
Nucleotide
ATGGCGGTCCGAGAAGCAGCAGTTATCGTAGAGTGTGCCAACAAGTCATATGGACAACAGAACGTGCTCAACGACCTAGACTTGACCGTCGAAAAGGGCACTATATATGGGCTGCTTGGTCCGTCGGGCTGTGGGAAAACGACGTTGCTCTCCTGCATAGTCGGAAGACGGAGCCTTGATAGTGGCAATGTCTGGGTGCTTGGTGGGAAGCCAGGAGAGAAGGGCAGCGGTGTGCCTGGCCCCAGAGTGGGATATATGCCGCAGGACATAGCTTTAGTTGGAGAGTTCACGGTCAGAGATGCTGTATACTACTTCGGTCGCATATACGGCATGGAGCATAAGAAGATGACGGAGCGCTTTGAGTTCCTCAGCTCGTTACTGGACCTGCCCAGTGGGAATCGACTCATTAAAAATTGCTCCGGAGGGCAGCAACGAAGAGTCTCGTTGGCAGCTGCTTTAGTCCACGACCCAGAGCTGTTAATCTTAGACGAACCGACGGTTGGATTGGACCCTGTATTGAGGGAGCAGTAA
ORF
Protein
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF13558.1 | Putative exonuclease SbcCD, C subunit | |
| Pfam/Hmmer3 | PF02562.11 | PhoH-like protein | |
| Pfam/Hmmer3 | PF05729.7 | NACHT domain | |
| Pfam/Hmmer3 | PF13481.1 | AAA domain | |
| Pfam/Hmmer3 | PF12846.2 | AAA-like domain | |
| Pfam/Hmmer3 | PF13245.1 | Part of AAA domain | |
| Pfam/Hmmer3 | PF13401.1 | AAA domain | |
| Pfam/Hmmer3 | PF13191.1 | AAA ATPase domain | |
| Pfam/Hmmer3 | PF01637.13 | Archaeal ATPase | |
| Pfam/Hmmer3 | PF13555.1 | P-loop containing region of AAA domain | |
| Pfam/Hmmer3 | PF00931.17 | NB-ARC domain | |
| Pfam/Hmmer3 | PF00006.20 | ATP synthase alpha/beta family, nucleotide-binding domain | |
| Pfam/Hmmer3 | PF00004.24 | ATPase family associated with various cellular activities (AAA) | |
| Pfam/Hmmer3 | PF00005.22 | ABC transporter | |
| Pfam/Hmmer3 | PF13476.1 | AAA domain | |
| Pfam/Hmmer3 | PF03193.11 | Protein of unknown function, DUF258 | |
| Pfam/Hmmer3 | PF13304.1 | AAA domain | |
| BLASTP/NCBI-nr | EHJ72145 | hypothetical protein KGM_02155 [Danaus plexippus] | 1e-90 |
| InterPro | IPR003439 | ABC_transporter-like | |
| InterPro | IPR017871 | ABC_transporter_CS | |
| Gene Ontology(MF) | GO:0005524 | ATP binding | |
| Gene Ontology(MF) | GO:0016887 | ATPase activity |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|