KAIKObase gene description page [BMgn010848/Gene16174]
Outline
| Official gene ID | BMgn010848 |
|---|---|
| Local gene ID | Gene16174 |
| Chromosome | unknown |
| Start (Chr.) | ND |
| End (Chr.) | ND |
| Scaffold | Bm_scaf228 |
| Start (Scaf.) | 64245 |
| End (Scaf.) | 69360 |
| Direction | - |
Member sequences
| ID | Type | Representative |
|---|---|---|
| BGIBMGA010848 | predicted gene | Yes |
Representative sequence
Nucleotide
ATGACGCCCTCGGACGCATATCTCTGCGCTGCGGCAGTCGTAGTATGCTCAGCTCTTAATGTATTCGTCATGCATCCATATATGATGGCCATATTACACATGGGAATGAAGTTCAGGGTCGCTTGCTGCTCGCTCATCTACAGAAAGTCTCTGCGATTATCCAAGACCGCTCTCGGCGAGACGACAATCGGTCAAGTCGTCAACCTGTTGTCGAACGATGTGAATCGTTTCGACGTCGCGGTGATATTCATCCACTATCTATGGATCGGGCCGCTGGTCACCGTGATCATCACATACTTTATGTGGCTGGAGATCAACTGGGCCGCGGTGGTCGGAGTAGCTTTCATGCTGGCATTCATACCGCTGCAAGCTTACTTGGGAAAGAAGACTTCGGTTTTGAGACTAAAAACGGCATTAAGGACCGACGAACGTGTCCGACTTATGAATGAAATTCTATCCGGTATTCAAGTCATCAAGATGTACACTTGGGAGAAACCTTTCGCTGACCTCGTCGCCAAAGCTAGGAAGTGA
ORF
Protein
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF03653.8 | Uncharacterised protein family (UPF0093) | |
| Pfam/Hmmer3 | PF13664.1 | Domain of unknown function (DUF4149) | |
| Pfam/Hmmer3 | PF09900.4 | Predicted membrane protein (DUF2127) | |
| Pfam/Hmmer3 | PF00664.18 | ABC transporter transmembrane region | |
| BLASTP/NCBI-nr | EHJ68225 | putative ATP-dependent bile acid permease [Danaus plexippus] | 1e-110 |
| InterPro | IPR011527 | ABC_transptrTM_dom_typ1 | |
| InterPro | IPR017940 | ABC_transporter_type1 | |
| InterPro | IPR001140 | ABC_transptr_TM_dom | |
| Gene Ontology(BP) | GO:0006810 | transport | |
| Gene Ontology(BP) | GO:0055085 | transmembrane transport | |
| Gene Ontology(MF) | GO:0005524 | ATP binding | |
| Gene Ontology(MF) | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | |
| Gene Ontology(CC) | GO:0016021 | integral to membrane |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|