KAIKObase gene description page [BMgn010976/Gene12957]
Outline
| Official gene ID | BMgn010976 |
|---|---|
| Local gene ID | Gene12957 |
| Chromosome | chr23 |
| Start (Chr.) | 2003740 |
| End (Chr.) | 2006474 |
| Scaffold | Bm_scaf83 |
| Start (Scaf.) | 448233 |
| End (Scaf.) | 450967 |
| Direction | - |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001171918.1 | publicly available mRNA | Yes |
| BGIBMGA010976 | predicted gene | No |
Representative sequence
Nucleotide
AGCATTATTTCTATCTAGCTAACTAAATAAAGACCTGTCTCTGACACAGCTGATACAACGAAATTATTTAAAAAAATCGTTGTTTCTGTTCAAGTGTACAATGTTACTGTTTTATTTAATGTTTGGATTGTTGAGTGGTGTGGAATTGGTGAAAGTTAAAATAACCGAAGGATGGTTGAGAGGTGAATTGTTGGAGGCTTCAACGGGAGACAAGAAATATTACAGTTTCAAAGGAATACCTTATGCGGCGCCACCTCTTGGAAATTTAAGATTTGTGGCTCCTCAACCGCCATTCTCCTGGAAAAACGTCAGGGAGGCCACACGTCATGGTCCGAAATGCATTCAGACGGAGACTTTGTCGACCAAACTGGTTCCCGGGAGTGAAGACTGTCTTTTTATCAACGTATACAGTCCAGACCTCAAACCCAAAGAGCAACTACCGGTTATGTTTTTCATATACGGCGGTGGATATAAATCAGGCTCTGGTGATGTCGACGATTATGGACCAGACTTTTTAATAAGATATGACGTAGTCGTGGTGACATTCAACTATAGGCTCGGCGCTTTGGGGTTTTTATGTACAGAAACTAAAGAAGTTCCAGGTAATGCTGGAATGAAAGACCAGGTTGCTGCACTGCGTTGGGTAAAAAGTAACATTGCCCATTTTGGTGGGAACCCAGATCAAGTTACGATTTTTGGACAAAGCGCTGGTGGTGCTTCTGTGGCTTTGCATACTTTGTCTCCCTTATCCAAAGGCTTATTTAAGCGGGCTATTGTAATGAGTGATTCATTCTATAATGACCCATTAAGACCGTTTGAATCTAAAATGAGGGCTTTGGTGTTAGGAAAACGATTGGGCTTAGACACGGCTAATACCACTGAACTTTTGGATTATCTACGGTGTGTGCCCGCTGAAAAGCTATTCATCCAACATCCTAATGTAATAATAACGGAGAGCATCGCTGAAAGTGTTATAAAATTATTCTATTTCACCCCAGTCGTGGAGAAAGATTTCGGTGATGATCATTTTTTGACTGAAGATCCCGAGGTGCTACTCTCTCAAGGTAAAATCCAACAAGACGTCGACTTAATAGTTGGGCACACGAACATAGAAGGTATTTACAATGTGGCTCAACTTCAAGATAGAGTCCTGAAATATTATCCTTTATACCAGGAACTTTTGGTGCCTCGTAAAATAAGCAACATAAGAGCCCCAACAAAAGTTCTGGAATTATCTCGTTTGATCTACAGATACTACTTCGGCGACAGACCAATCAATTTGGATACTATCAAAGAATTCGTTTACTACTACACCGACGCGAACTATGCTTATGATGTTTATAGATTTATAAACAAGTTTCCTCAAAGTGCTCACAAGAATCGGTTCTATTACATCTTTTCACCGTATACAGAGAGGAATTATTATTCAAGACTAGGCGCTGAGCGTTATGGCCTATACGGGTCAGCTCATAGAGATGATCTGATGTACTTGTTCGACGGAAAACGATTTAATTTGACTTTAGTTAAGAATAGTACGTCGTTCAAGATTATAAATAATTTCTGTGCCTTGTTGACGAACTTCGCTAAATTTGGGAATCCAACTCCAGATAATTCTGAAAACGTGATTTGGCCAAAATTCGATAAAGAACAGCGATACCTGAACATTGGAAAAGAGCTTACAGCTAGAAGAATTATGTTTCAGCAGAGTTCTCTTTCATTTTGGAAGAATATTCTAGAGCGAGCCAAACTTGAATTTTAATAATGCAGAAAATGGGATACGCTTTTGTGAAAGCATAAACTTTACTTTTCTACTGCTATAATAGATGGATAAGTAAACTGCTCATAAATAAAAAAAAAAAAAAAAAAAAAAAAA
ORF
ATGTTACTGTTTTATTTAATGTTTGGATTGTTGAGTGGTGTGGAATTGGTGAAAGTTAAAATAACCGAAGGATGGTTGAGAGGTGAATTGTTGGAGGCTTCAACGGGAGACAAGAAATATTACAGTTTCAAAGGAATACCTTATGCGGCGCCACCTCTTGGAAATTTAAGATTTGTGGCTCCTCAACCGCCATTCTCCTGGAAAAACGTCAGGGAGGCCACACGTCATGGTCCGAAATGCATTCAGACGGAGACTTTGTCGACCAAACTGGTTCCCGGGAGTGAAGACTGTCTTTTTATCAACGTATACAGTCCAGACCTCAAACCCAAAGAGCAACTACCGGTTATGTTTTTCATATACGGCGGTGGATATAAATCAGGCTCTGGTGATGTCGACGATTATGGACCAGACTTTTTAATAAGATATGACGTAGTCGTGGTGACATTCAACTATAGGCTCGGCGCTTTGGGGTTTTTATGTACAGAAACTAAAGAAGTTCCAGGTAATGCTGGAATGAAAGACCAGGTTGCTGCACTGCGTTGGGTAAAAAGTAACATTGCCCATTTTGGTGGGAACCCAGATCAAGTTACGATTTTTGGACAAAGCGCTGGTGGTGCTTCTGTGGCTTTGCATACTTTGTCTCCCTTATCCAAAGGCTTATTTAAGCGGGCTATTGTAATGAGTGATTCATTCTATAATGACCCATTAAGACCGTTTGAATCTAAAATGAGGGCTTTGGTGTTAGGAAAACGATTGGGCTTAGACACGGCTAATACCACTGAACTTTTGGATTATCTACGGTGTGTGCCCGCTGAAAAGCTATTCATCCAACATCCTAATGTAATAATAACGGAGAGCATCGCTGAAAGTGTTATAAAATTATTCTATTTCACCCCAGTCGTGGAGAAAGATTTCGGTGATGATCATTTTTTGACTGAAGATCCCGAGGTGCTACTCTCTCAAGGTAAAATCCAACAAGACGTCGACTTAATAGTTGGGCACACGAACATAGAAGGTATTTACAATGTGGCTCAACTTCAAGATAGAGTCCTGAAATATTATCCTTTATACCAGGAACTTTTGGTGCCTCGTAAAATAAGCAACATAAGAGCCCCAACAAAAGTTCTGGAATTATCTCGTTTGATCTACAGATACTACTTCGGCGACAGACCAATCAATTTGGATACTATCAAAGAATTCGTTTACTACTACACCGACGCGAACTATGCTTATGATGTTTATAGATTTATAAACAAGTTTCCTCAAAGTGCTCACAAGAATCGGTTCTATTACATCTTTTCACCGTATACAGAGAGGAATTATTATTCAAGACTAGGCGCTGAGCGTTATGGCCTATACGGGTCAGCTCATAGAGATGATCTGATGTACTTGTTCGACGGAAAACGATTTAATTTGACTTTAGTTAAGAATAGTACGTCGTTCAAGATTATAAATAATTTCTGTGCCTTGTTGACGAACTTCGCTAAATTTGGGAATCCAACTCCAGATAATTCTGAAAACGTGATTTGGCCAAAATTCGATAAAGAACAGCGATACCTGAACATTGGAAAAGAGCTTACAGCTAGAAGAATTATGTTTCAGCAGAGTTCTCTTTCATTTTGGAAGAATATTCTAGAGCGAGCCAAACTTGAATTTTAA
Protein
MLLFYLMFGLLSGVELVKVKITEGWLRGELLEASTGDKKYYSFKGIPYAAPPLGNLRFVAPQPPFSWKNVREATRHGPKCIQTETLSTKLVPGSEDCLFINVYSPDLKPKEQLPVMFFIYGGGYKSGSGDVDDYGPDFLIRYDVVVVTFNYRLGALGFLCTETKEVPGNAGMKDQVAALRWVKSNIAHFGGNPDQVTIFGQSAGGASVALHTLSPLSKGLFKRAIVMSDSFYNDPLRPFESKMRALVLGKRLGLDTANTTELLDYLRCVPAEKLFIQHPNVIITESIAESVIKLFYFTPVVEKDFGDDHFLTEDPEVLLSQGKIQQDVDLIVGHTNIEGIYNVAQLQDRVLKYYPLYQELLVPRKISNIRAPTKVLELSRLIYRYYFGDRPINLDTIKEFVYYYTDANYAYDVYRFINKFPQSAHKNRFYYIFSPYTERNYYSRLGAERYGLYGSAHRDDLMYLFDGKRFNLTLVKNSTSFKIINNFCALLTNFAKFGNPTPDNSENVIWPKFDKEQRYLNIGKELTARRIMFQQSSLSFWKNILERAKLEF*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF07859.8 | alpha/beta hydrolase fold | |
| Pfam/Hmmer3 | PF12695.2 | Alpha/beta hydrolase family | |
| Pfam/Hmmer3 | PF00756.15 | Putative esterase | |
| Pfam/Hmmer3 | PF00135.23 | Carboxylesterase family | |
| Pfam/Hmmer3 | PF00326.16 | Prolyl oligopeptidase family | |
| BLASTP/NCBI-nr | NP_001165389 | carboxyl/cholinesterase 1 precursor [Bombyx mori] dbj|BAI66477.1| carboxyl/cholinesterase 1 [Bombyx mori] | 0.0 |
| InterPro | IPR019826 | Carboxylesterase_B_AS | |
| InterPro | IPR019819 | Carboxylesterase_B_CS | |
| InterPro | IPR002018 | CarbesteraseB |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| M. sexta | Msex000469-RA | scaffold00004 | 1719895 | 1735930 | - |
| P. xylostella | Px017995.1 | scaffold_99 | 277607 | 280135 | + |