KAIKObase gene description page [BMgn013236/Gene09803]
Outline
| Official gene ID | BMgn013236 |
|---|---|
| Local gene ID | Gene09803 |
| Chromosome | chr16 |
| Start (Chr.) | 13634704 |
| End (Chr.) | 13638098 |
| Scaffold | Bm_scaf39 |
| Start (Scaf.) | 1600622 |
| End (Scaf.) | 1604016 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| AK384317 | full-length cDNA | Yes |
| NM_001141942.1 | publicly available mRNA | No |
| BGIBMGA013236 | predicted gene | No |
Representative sequence
Nucleotide
CGGCCGGCCGATGAGAACAGTCTCAACATGTCAGTGAGCGCATTAGTATTTTCCGCCTTCGTTTTATTAGTGACGTATATTTACTATTGGTCGACCCGGAAATTCGATTATTGGAAGCGAAAAAATGTGCCATACGCTAAACCTGTGCCGTTCTTTGGGAACTACATGCGATATATCACACTGCAGAGCTTCCTAGGAGATGTGATGCAGAAGCTGTGCCAGCAGTTCCCTGACAGACCGTACTTCGGATCGTTTTACGGTACGGAACCAGCCCTAGTCTTGCAGAATCCGGAGATCATCAAGCAAGTTTTTACTAAAGACTTCTATTACTTCAACAGCCGCGAAAACAGGGATTACAATCATAAGGAAGTATTCACACAGAACTTGTTCTTCGCCAATGGAGATAGATGGAAGGTAATACGTCAGAACCTAACCCCGCTGTTCTCATCGTCAAAGATGAAGAATATGTTTTACTTGGTGGAAAAATGCAACCATTCCCTTGAAGACATGCTGGACAAGGAAACCAAAGACTTGCAAAGTATTGAGATCCGGTCTGCTATGATAAGGTACACACTGGACTCTATCTGCTCTAGCGCCTTCGGTATCGAAACAAATACCTTAAGTGAGGGCGCAGAAAATAGTCCTTTTCCAAGCATGGGAAGCACCATATTTAGTTCTTCGATAACTCGAGGACTGAAATTGATTGGTCGTTCGATGTGGCCGGGCATATTCTATAAGCTTGGTCTCCGGTGCTTTCCAACGGAAATTGACGATTTCTTTGAGAGACTCCTGACTGAGGTGTTCGAGAACCGTGGCTACAAGCCGACGAACCGTAACGATTTCGTGGACTTAATCTTGAGTCTGAAACAAAACGATTACCTGACCGGAGATGGCTTGGTTCCCAAAAACGTGGACGCAAAGAAAGTGACGGTCAAGGTTGACGACGCCTTATTGATAGCGCAGTGCGTAGTCTTCTTTGGTGCAGGCTTCGAAACGTCAGCTACCACTCTCTCGGCAGCCCTATACGAGCTGGCCAAGAACCCAGAAGCCCAAAGGCGCGCTCAAGAGGAAGTTGACGAACTTTTGCTAAAACACAACAACAAGTTAAATTATGATTGTTTAGCAGAATTACCGTACTTGGAGGCATGTATGAACGAAGCGATGCGTCTGTACCCAGTATTTCCTAATATCACCCGCGAAACCGTTGCCGACTATACGTTTCCCGATGGCCTAAGGATAGATAAGGGTATGCGTGTGCATGTCCCGGTGTATGCTATCCACCGTAACCCCGACAACTTTCCTGACCCGGAAGAGTTTCGTCCTGAGAGACATTTAGGAGACGCCAAAAACGACATTAAGCAGTTCACGTTCTTCCCGTTCGGAGAAGGGCCCAGGATATGCATTGGTATGCGCTTCGGGAAAATGCAGACTATCGCTGGGCTGATTACCTGTTTGAAAAAGTTCAACTTCGAACTGGCGGACGGTATGCCGAGGACGCTAGCTTTTAGATCCACAACGTTGCTTACACAGCCGAGTACCGGATTATTCCTGAAGGCCACACCACGAGACGGATGGGAGCAACGTATTTTCGCACGTTAAATCTTCCATCAACTATATATTTATTTTTGGAAATGTTTATATAAAATCACATTACATATTACAAAATAAAGCGATTACATATCAATGACCTTTGGCCGGGCCGTCGCGACCACTGTAATCTATTTCTTCAATTGTGTTTTTAAACTATTTCTAGGCGAAAGTATCATTCATAGAATAAATACGAAAATTGATTTTGTATGATTAAATAATTATCTGTGTATAATCTCAATTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ORF
ATGTCAGTGAGCGCATTAGTATTTTCCGCCTTCGTTTTATTAGTGACGTATATTTACTATTGGTCGACCCGGAAATTCGATTATTGGAAGCGAAAAAATGTGCCATACGCTAAACCTGTGCCGTTCTTTGGGAACTACATGCGATATATCACACTGCAGAGCTTCCTAGGAGATGTGATGCAGAAGCTGTGCCAGCAGTTCCCTGACAGACCGTACTTCGGATCGTTTTACGGTACGGAACCAGCCCTAGTCTTGCAGAATCCGGAGATCATCAAGCAAGTTTTTACTAAAGACTTCTATTACTTCAACAGCCGCGAAAACAGGGATTACAATCATAAGGAAGTATTCACACAGAACTTGTTCTTCGCCAATGGAGATAGATGGAAGGTAATACGTCAGAACCTAACCCCGCTGTTCTCATCGTCAAAGATGAAGAATATGTTTTACTTGGTGGAAAAATGCAACCATTCCCTTGAAGACATGCTGGACAAGGAAACCAAAGACTTGCAAAGTATTGAGATCCGGTCTGCTATGATAAGGTACACACTGGACTCTATCTGCTCTAGCGCCTTCGGTATCGAAACAAATACCTTAAGTGAGGGCGCAGAAAATAGTCCTTTTCCAAGCATGGGAAGCACCATATTTAGTTCTTCGATAACTCGAGGACTGAAATTGATTGGTCGTTCGATGTGGCCGGGCATATTCTATAAGCTTGGTCTCCGGTGCTTTCCAACGGAAATTGACGATTTCTTTGAGAGACTCCTGACTGAGGTGTTCGAGAACCGTGGCTACAAGCCGACGAACCGTAACGATTTCGTGGACTTAATCTTGAGTCTGAAACAAAACGATTACCTGACCGGAGATGGCTTGGTTCCCAAAAACGTGGACGCAAAGAAAGTGACGGTCAAGGTTGACGACGCCTTATTGATAGCGCAGTGCGTAGTCTTCTTTGGTGCAGGCTTCGAAACGTCAGCTACCACTCTCTCGGCAGCCCTATACGAGCTGGCCAAGAACCCAGAAGCCCAAAGGCGCGCTCAAGAGGAAGTTGACGAACTTTTGCTAAAACACAACAACAAGTTAAATTATGATTGTTTAGCAGAATTACCGTACTTGGAGGCATGTATGAACGAAGCGATGCGTCTGTACCCAGTATTTCCTAATATCACCCGCGAAACCGTTGCCGACTATACGTTTCCCGATGGCCTAAGGATAGATAAGGGTATGCGTGTGCATGTCCCGGTGTATGCTATCCACCGTAACCCCGACAACTTTCCTGACCCGGAAGAGTTTCGTCCTGAGAGACATTTAGGAGACGCCAAAAACGACATTAAGCAGTTCACGTTCTTCCCGTTCGGAGAAGGGCCCAGGATATGCATTGGTATGCGCTTCGGGAAAATGCAGACTATCGCTGGGCTGATTACCTGTTTGAAAAAGTTCAACTTCGAACTGGCGGACGGTATGCCGAGGACGCTAGCTTTTAGATCCACAACGTTGCTTACACAGCCGAGTACCGGATTATTCCTGAAGGCCACACCACGAGACGGATGGGAGCAACGTATTTTCGCACGTTAA
Protein
MSVSALVFSAFVLLVTYIYYWSTRKFDYWKRKNVPYAKPVPFFGNYMRYITLQSFLGDVMQKLCQQFPDRPYFGSFYGTEPALVLQNPEIIKQVFTKDFYYFNSRENRDYNHKEVFTQNLFFANGDRWKVIRQNLTPLFSSSKMKNMFYLVEKCNHSLEDMLDKETKDLQSIEIRSAMIRYTLDSICSSAFGIETNTLSEGAENSPFPSMGSTIFSSSITRGLKLIGRSMWPGIFYKLGLRCFPTEIDDFFERLLTEVFENRGYKPTNRNDFVDLILSLKQNDYLTGDGLVPKNVDAKKVTVKVDDALLIAQCVVFFGAGFETSATTLSAALYELAKNPEAQRRAQEEVDELLLKHNNKLNYDCLAELPYLEACMNEAMRLYPVFPNITRETVADYTFPDGLRIDKGMRVHVPVYAIHRNPDNFPDPEEFRPERHLGDAKNDIKQFTFFPFGEGPRICIGMRFGKMQTIAGLITCLKKFNFELADGMPRTLAFRSTTLLTQPSTGLFLKATPRDGWEQRIFAR*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF01924.11 | Hydrogenase formation hypA family | |
| Pfam/Hmmer3 | PF00067.17 | Cytochrome P450 | |
| BLASTP/NCBI-nr | ADD70250 | cytochrome P450 [Bombyx mori] | 0.0 |
| InterPro | IPR001128 | Cyt_P450 | |
| InterPro | IPR002401 | Cyt_P450_E_grp-I | |
| InterPro | IPR017972 | Cyt_P450_CS | |
| Gene Ontology(MF) | GO:0009055 | electron carrier activity | |
| Gene Ontology(MF) | GO:0020037 | heme binding | |
| Gene Ontology(MF) | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| Gene Ontology(MF) | GO:0005506 | iron ion binding | |
| Gene Ontology(BP) | GO:0055114 | oxidation-reduction process |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|---|---|---|
| Gene09801 | BMgn013237 | chr16 | 13623578 | 13627198 | Bm_scaf39 | 1611522 | 1615142 | + |
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| M. sexta | Msex015766-RA | scaffold01216 | 2 | 3700 | + |
| M. sexta | Msex015766-RB | scaffold01216 | 2 | 5493 | + |
| M. sexta | Msex015028-RB | scaffold00861 | 50546 | 57550 | + |