KAIKObase gene description page [BMgn015346/Gene04046]
Outline
| Official gene ID | BMgn015346 |
|---|---|
| Local gene ID | Gene04046 |
| Chromosome | chr7 |
| Start (Chr.) | 11298022 |
| End (Chr.) | 11298881 |
| Scaffold | Bm_scaf15 |
| Start (Scaf.) | 6109271 |
| End (Scaf.) | 6110130 |
| Direction | - |
Member sequences
| ID | Type | Representative |
|---|---|---|
| NM_001043732.1 | publicly available mRNA | Yes |
Representative sequence
Nucleotide
ATTCGCAATTCAAACTTCTATCAGTACGGACGTCTCGTCTACGATATACTCACAATAATTTAACAAGAATGGTGCTAACACTCTACAAGATGGACGCCAGTCCCCCAGTCCGCGCTGTCTACATGGTCATCGAAGCACTGAGCATTCCCAACGTAAAATACGTAGACGTGGACCTCTTAGCTGAAGATCATTTGAAAGAGGAATTCTTGAAGCTAAACCCTCAACACACCATTCCTATGCTGACAGATGACAAATTCGTCATCTGGGACAGTCATGCAATAGCTACATATTTGCTAAACAAATACGGCAAAGGCAGTTCATACTATCCCGAGGATCCAGAGAAGAGAGCCCTGATTGAGATGAGATTACATTTTGACAGTGGAATATTGTATCCTGCTTTGCGAGAAAACGATGAGCCCATATTCTTTTGGGGAGAGACAACCTTCAAGCCTGAAGGCCTGGCCAAAATAAAGTCAGCTTATGATTTCACGGAGAAGTTTCTTTCTGATTCACCGTGGATCGCAGGCGATGACGTCACTGTGGCTGATATGAGCTGTGTTGCTACAATCGGCAGTTTGGATGCGCTCTTGCCTATTAATGAGAAAGAGTATCCCAAGATAACTTCGTGGTTGAAGCGCTGTTCTGAGCTAGACTTTTACCAGAGAGGAAACAACGTAAAAGGCCTATTGGAATTCAAGGCGTTACTGAAACAATACCTGAGTCGTGGAAAAGAATAAAAAAAATCGATGATTGCATAGTCACTAGCAATCACTAGAAGTTTTCAATTAAATGTTATTATAAAATCTTTACGACTGATTTATTATGACTCGCGATATAAATATGTATCGATTGTAATTTATGTTCATTGGTCATGGAAAAAAAAAAAAAAAA
ORF
ATGGTGCTAACACTCTACAAGATGGACGCCAGTCCCCCAGTCCGCGCTGTCTACATGGTCATCGAAGCACTGAGCATTCCCAACGTAAAATACGTAGACGTGGACCTCTTAGCTGAAGATCATTTGAAAGAGGAATTCTTGAAGCTAAACCCTCAACACACCATTCCTATGCTGACAGATGACAAATTCGTCATCTGGGACAGTCATGCAATAGCTACATATTTGCTAAACAAATACGGCAAAGGCAGTTCATACTATCCCGAGGATCCAGAGAAGAGAGCCCTGATTGAGATGAGATTACATTTTGACAGTGGAATATTGTATCCTGCTTTGCGAGAAAACGATGAGCCCATATTCTTTTGGGGAGAGACAACCTTCAAGCCTGAAGGCCTGGCCAAAATAAAGTCAGCTTATGATTTCACGGAGAAGTTTCTTTCTGATTCACCGTGGATCGCAGGCGATGACGTCACTGTGGCTGATATGAGCTGTGTTGCTACAATCGGCAGTTTGGATGCGCTCTTGCCTATTAATGAGAAAGAGTATCCCAAGATAACTTCGTGGTTGAAGCGCTGTTCTGAGCTAGACTTTTACCAGAGAGGAAACAACGTAAAAGGCCTATTGGAATTCAAGGCGTTACTGAAACAATACCTGAGTCGTGGAAAAGAATAA
Protein
MVLTLYKMDASPPVRAVYMVIEALSIPNVKYVDVDLLAEDHLKEEFLKLNPQHTIPMLTDDKFVIWDSHAIATYLLNKYGKGSSYYPEDPEKRALIEMRLHFDSGILYPALRENDEPIFFWGETTFKPEGLAKIKSAYDFTEKFLSDSPWIAGDDVTVADMSCVATIGSLDALLPINEKEYPKITSWLKRCSELDFYQRGNNVKGLLEFKALLKQYLSRGKE*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF13409.1 | Glutathione S-transferase, N-terminal domain | |
| Pfam/Hmmer3 | PF13410.1 | Glutathione S-transferase, C-terminal domain | |
| Pfam/Hmmer3 | PF02798.15 | Glutathione S-transferase, N-terminal domain | |
| Pfam/Hmmer3 | PF13417.1 | Glutathione S-transferase, N-terminal domain | |
| Pfam/Hmmer3 | PF00043.20 | Glutathione S-transferase, C-terminal domain | |
| Pfam/Hmmer3 | PF00462.19 | Glutaredoxin | |
| BLASTP/NCBI-nr | NP_001037197 | glutathione S-transferase epsilon 1 [Bombyx mori] gb|AAO41719.1| glutathione S-transferase 1 [Bombyx mori] gb|ABI15774.1| glutathione S-transferase 1 [Bombyx mori] | 1e-164 |
| InterPro | IPR004046 | GST_C | |
| InterPro | IPR010987 | Glutathione-S-Trfase_C-like | |
| InterPro | IPR017933 | Glutathione_S_Trfase/Cl_chnl_C | |
| InterPro | IPR004045 | Glutathione_S-Trfase_N | |
| InterPro | IPR012336 | Thioredoxin-like_fold | |
| Gene Ontology(MF) | GO:0005515 | protein binding |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|