KAIKObase gene description page [BMgn015942/Gene07522]
Outline
| Official gene ID | BMgn015942 |
|---|---|
| Local gene ID | Gene07522 |
| Chromosome | chr13 |
| Start (Chr.) | 1279081 |
| End (Chr.) | 1282317 |
| Scaffold | Bm_scaf104 |
| Start (Scaf.) | 5643 |
| End (Scaf.) | 8879 |
| Direction | + |
Member sequences
| ID | Type | Representative |
|---|---|---|
| AK378436 | full-length cDNA | Yes |
| NM_001173335.1 | publicly available mRNA | No |
| NM_001123029.2 | publicly available mRNA | No |
Representative sequence
Nucleotide
TAAATGAATTGATTCTTTGGTATAATTTTATGAGTGACTCGTCGTGGCGTACATTTATATTTTATTTCTTTTCCTCTTATCGCCAATTTATTCAACATATTTGGTTGTTAATATTTTAAATTAGTTTACATTTCCAAAGACATGTAAAGTCTCATTTGCATTTAATGTAACATCTGTGTTAATTACGCGTTAGAAAAAATCTGGGCGAAAAATCAATTTAATTCGTATGAAGTTTCTGGTGAACCAAGGTCTTCCTATTGAAAATTATTTCCTTTTGTAGCGTGTCTGAATTTTTTCCAATGGCAGTTACATTCCCAATAGTGATTTTAACGTTGACGCTAATAAATAACATTGACGCTATATCTAGGATCGATCCTTTGGTCGAAACTAAAGTCGGATTGATCAAAGGATTAAGATCGGATAATAATGATTTTTCTTTATTTTTGGGTGTACCATACGCGAAAGTAAACAGGAGTAATCCATTTGGGGTGTCCATCCCATACCCAAGTTTCCTAGACACATTTGAAGCCTTCCAAGAATCCCCAAGATGCCCACAAGCGAGCACATCATCAAACCAATCTTTGGACTGCCTCAGCCTTAACATTTACGTGCCCACAAACGCAACGTCTCAGAATAAATTACCCGTTATGGTTTGGATTCATGGTGGTGCATTTTCAAGTGGGTCCGGCAGCAGGGACAGTGCTGGCCCCGAGTTTCTCATCAGATATGATGTTATACTTGTTACGGTGTATTATCGTCTTGGGCCTTATGGTTTTATGTGCCTGGATCATCCAGAGGTGGCAGGCAATCAAGGTCTGAAGGACCAATTAATGGCTTTAAGATGGATTAATGAAAACATTGAAGCCTTCGGAGGGGACGCTAATAAAATAACAATATTTGGCGAAAGTGCAGGTGGACATTCCGTGGAGCTACATTTACTATCTCAAGCCGAAATTTTGTACAACAGAGTGATTTTACAAAGCGGTAGCGCTGAAGCGCGAACGGTACTGATCGAACCTGATAAATCTGCTCCATTGAAAATTGCCGATCGCCTGGGTCATACAACTGACAATATTGAAGAGGCACTAACATTTTTGTCATCAGCTAGCACAGAATCAGTAATTACAGCGGCATCAAGTCTAGGTATCGAGTTTAAGCCTTGTGCTGAAAATCCGTTTGAACAAGTTGATTCTTTCATAACAAAACGTTGGGCAAATGCAAAAATACCAAAGGTAGCCAACATACCTGTGCTGATAGGTTTTAATGATCATGAATTAATGATAACGCATGTGCTTGGCGATGCCCAGCATTTTGCGTCTTTGGACATTTTCACCACATACTTAAACAAAACCTTTAACTTCGATAGCGACACTTTGGAGGAAATGACTCAGTACGTTCGGCAATTTTACATCGGAGATGATCCGATTACTGAAGAAAAAAGGTGGGAGATAATTAATTATGATTCAGATTTTGTTTACATTCATCCCATTCAAAGGACTATCAATAAATTTATTGAAGGACATGCTCGTAATATTTACTATTACATGTTCTCTTATGACGGTGGGAGGAATTTGGTAAAAGTGAGTCGTGGTATTAATGCACCTGGGGTTGCACATGCTGATGAGCTTGGATATATATTTTCTATTAAGAGTTTATCTAATAAGACCAGCCCTGAAGATCAGCTTATGGTTGATCGAATGACCACAATGTGGACAAACTTCGCCAAATTCGGCGACCCCACTCCAGAAACCACTGAGCTATTACCAATCAAATGGGATCCAATAACGAAGGACAGCTATAACTATTTGAAAATTGATTCGGTGCTTACTTTAGGCAATCGACCTTACAAAGAAAGGATGACTCTATGGGATTTATTCTACAAACTGAATGAAAAGAAACAAAAGTACTACGATGAGAGCAACGAAGATTCTTTTTAATATTTGTATAATATTATAAAATATGCTTTAATTTTTTGTAATCCAGCTGTTTTTGATTGTATAAGATTTAAATATCGAAATTGCATGCTATCAAATAGGTAGTCTTAGATTGTGGTCTTTATAAACTTCACCACGCTTTAGATTGACTATCTTTATCGACCTTATCTCTTATATTATGTCCCATCTTCTCTTGCCTTGTGCAGATATCATTTGATGGAACTATCGTATCTTATCATACTATACACGCGGCATTTCCATTTAAACATATATATTTTTTACTGTTTAGTTCTTCTATCGTTCTCTCTCGTGTTTAAGAGTGTGTTTATAAATCATAAATGTAATGTAACAAATGGATGTAATATAATATGGTGTCTATGTAGAAAATCTAAACTCCAAAGACACTCGCGAGAAACATCATAAAACATCATAAACATAATTAATAAAATAGAATTTATACATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ORF
ATGGCAGTTACATTCCCAATAGTGATTTTAACGTTGACGCTAATAAATAACATTGACGCTATATCTAGGATCGATCCTTTGGTCGAAACTAAAGTCGGATTGATCAAAGGATTAAGATCGGATAATAATGATTTTTCTTTATTTTTGGGTGTACCATACGCGAAAGTAAACAGGAGTAATCCATTTGGGGTGTCCATCCCATACCCAAGTTTCCTAGACACATTTGAAGCCTTCCAAGAATCCCCAAGATGCCCACAAGCGAGCACATCATCAAACCAATCTTTGGACTGCCTCAGCCTTAACATTTACGTGCCCACAAACGCAACGTCTCAGAATAAATTACCCGTTATGGTTTGGATTCATGGTGGTGCATTTTCAAGTGGGTCCGGCAGCAGGGACAGTGCTGGCCCCGAGTTTCTCATCAGATATGATGTTATACTTGTTACGGTGTATTATCGTCTTGGGCCTTATGGTTTTATGTGCCTGGATCATCCAGAGGTGGCAGGCAATCAAGGTCTGAAGGACCAATTAATGGCTTTAAGATGGATTAATGAAAACATTGAAGCCTTCGGAGGGGACGCTAATAAAATAACAATATTTGGCGAAAGTGCAGGTGGACATTCCGTGGAGCTACATTTACTATCTCAAGCCGAAATTTTGTACAACAGAGTGATTTTACAAAGCGGTAGCGCTGAAGCGCGAACGGTACTGATCGAACCTGATAAATCTGCTCCATTGAAAATTGCCGATCGCCTGGGTCATACAACTGACAATATTGAAGAGGCACTAACATTTTTGTCATCAGCTAGCACAGAATCAGTAATTACAGCGGCATCAAGTCTAGGTATCGAGTTTAAGCCTTGTGCTGAAAATCCGTTTGAACAAGTTGATTCTTTCATAACAAAACGTTGGGCAAATGCAAAAATACCAAAGGTAGCCAACATACCTGTGCTGATAGGTTTTAATGATCATGAATTAATGATAACGCATGTGCTTGGCGATGCCCAGCATTTTGCGTCTTTGGACATTTTCACCACATACTTAAACAAAACCTTTAACTTCGATAGCGACACTTTGGAGGAAATGACTCAGTACGTTCGGCAATTTTACATCGGAGATGATCCGATTACTGAAGAAAAAAGGTGGGAGATAATTAATTATGATTCAGATTTTGTTTACATTCATCCCATTCAAAGGACTATCAATAAATTTATTGAAGGACATGCTCGTAATATTTACTATTACATGTTCTCTTATGACGGTGGGAGGAATTTGGTAAAAGTGAGTCGTGGTATTAATGCACCTGGGGTTGCACATGCTGATGAGCTTGGATATATATTTTCTATTAAGAGTTTATCTAATAAGACCAGCCCTGAAGATCAGCTTATGGTTGATCGAATGACCACAATGTGGACAAACTTCGCCAAATTCGGCGACCCCACTCCAGAAACCACTGAGCTATTACCAATCAAATGGGATCCAATAACGAAGGACAGCTATAACTATTTGAAAATTGATTCGGTGCTTACTTTAGGCAATCGACCTTACAAAGAAAGGATGACTCTATGGGATTTATTCTACAAACTGAATGAAAAGAAACAAAAGTACTACGATGAGAGCAACGAAGATTCTTTTTAA
Protein
MAVTFPIVILTLTLINNIDAISRIDPLVETKVGLIKGLRSDNNDFSLFLGVPYAKVNRSNPFGVSIPYPSFLDTFEAFQESPRCPQASTSSNQSLDCLSLNIYVPTNATSQNKLPVMVWIHGGAFSSGSGSRDSAGPEFLIRYDVILVTVYYRLGPYGFMCLDHPEVAGNQGLKDQLMALRWINENIEAFGGDANKITIFGESAGGHSVELHLLSQAEILYNRVILQSGSAEARTVLIEPDKSAPLKIADRLGHTTDNIEEALTFLSSASTESVITAASSLGIEFKPCAENPFEQVDSFITKRWANAKIPKVANIPVLIGFNDHELMITHVLGDAQHFASLDIFTTYLNKTFNFDSDTLEEMTQYVRQFYIGDDPITEEKRWEIINYDSDFVYIHPIQRTINKFIEGHARNIYYYMFSYDGGRNLVKVSRGINAPGVAHADELGYIFSIKSLSNKTSPEDQLMVDRMTTMWTNFAKFGDPTPETTELLPIKWDPITKDSYNYLKIDSVLTLGNRPYKERMTLWDLFYKLNEKKQKYYDESNEDSF*
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
|---|---|---|---|
| Pfam/Hmmer3 | PF07859.8 | alpha/beta hydrolase fold | |
| Pfam/Hmmer3 | PF00756.15 | Putative esterase | |
| Pfam/Hmmer3 | PF00135.23 | Carboxylesterase family | |
| Pfam/Hmmer3 | PF00326.16 | Prolyl oligopeptidase family | |
| BLASTP/NCBI-nr | NP_001116501 | alpha-esterase 19 isoform 1 precursor [Bombyx mori] gb|ACB12411.1| carboxylesterase CarE-8 variant 1 [Bombyx mori] | 0.0 |
| InterPro | IPR019826 | Carboxylesterase_B_AS | |
| InterPro | IPR002018 | CarbesteraseB |
Expression data (EST count)
Paralog/Ortholog genes
Paralogous genes
| Gene ID | Official gene ID | Chr. | Chr. start | Chr. end | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|---|---|---|
| Gene07523 | BMgn000837 | chr13 | 1789688 | 1792106 | Bm_scaf1 | 16199666 | 16202084 | - |
| Gene02871 | BMgn003517 | chr5 | 13859881 | 13862316 | Bm_scaf9 | 3863104 | 3865539 | - |
Orthologous genes
| Species | Gene ID | Scaffold ID | Start | End | Direction |
|---|---|---|---|---|---|
| D. plexippus | DPOGS203350 | DPSCF300003 | 74503 | 76913 | - |
| H. melpomene | HMEL014427 | HE671449 | 348243 | 366229 | + |
| M. sexta | Msex008069-RA | scaffold00159 | 97373 | 104205 | + |
| M. sexta | Msex004708-RA | scaffold00071 | 451071 | 461584 | - |
| M. sexta | Msex012538-RA | scaffold00407 | 9557 | 18685 | - |
| P. xylostella | Px006430.1 | scaffold_228 | 56163 | 61177 | + |