2011.10.28
cDNA libraries definition of Bombyx mori for the FLcDNA database
Registered library name Library synonym Local library name Strain/Race Organ/Tissue Developmental stage Sex Vector Cloning sites Sequence direction Clonename [number]:
well_or_serial		 Note
an-- NA an-- Shuko x Ryuhaku antenna adult stage Unknown pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') an--[ number ]
bmmt NA bmmt p50T Malpighian tubule fifth instar larval stage mixed pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer bmmt_[ number ]
BmN- NA BmN- Unknown ovary-derived cell-line NA NA pCMVFL3, Oligo-cap, full-length Unknown sequenced from 5' BmN-[ number ] Unknown; BmN cultured cell
bmov NA bmov p50T ovary mixture of pupal stage P1 to P7 female pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with pT primer bmov[ number ]
bmte NA bmte p50T testis pupal stage (day-4 after pupation) male pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer bmte{ number ]
br-- NA br-- p50 brain pupal stage P0 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') br--[ number ]
brP- NA brP- p50 brain pupal stage P1; pupal stage P2; pupal stage P3; pupal stage P4; pupal stage P5; pupal stage P6; pupal stage P7 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') brP-[ number ]
brS- NA brS- p50 brain spinning stage S0;spinning stage S1;spinning stage S2;spinning stage S3; spinning stage S4 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') brS-[ number ]
caL- NA caL- p50 corpora allata fifth instar larval stage mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') caL-[ number ]
ce-- NA ce-- C202 x J201 compound eyes fifth instar larval stage;pupal stage mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') ce--[ number ]
ceN- NA ceN- C202 x J201 compound eyes fifth instar larval stage;pupal stage mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') ceN-[ number ] the same as ce-- but a different preparation
e100 NA e100 p50T embryo fertilized egg stage H100 mixed pGCAPI, G-capping, full-length Unknown Sequenced from 5' with T7 primer e100[ number ]
e40h NA e40h p50 diapause-destined embryo fertilized egg stage H40 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') e40h[ number ]
e96h NA e96h p50 nondiapause-destined embryo fertilized egg stage H96 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') e96h[ number ] Diapause-cancelled embryos
epV3 NA epV3 p50 epidermis fifth instar larval stage D3 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') epV3[ number ]
F1mg NA F1mg F1 (J150 x J203) midgut fourth instar larval stage D2 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') F1mg[ number ]
famL NA famL N137 X C146 mixture of antenna and maxillary galea fifth instar larval stage (day-2 to day-3) mixed pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer famL[ number ]
fbpv NA fbpv Shuko x Ryuhaku fat body spinning stage S2; BmNPV infected H2 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') fbpv[ number ] BmNPV infected; 2hr postinfection
fbS2 NA fbS2 C202 x J201 fat body spinning stage S2 male pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') fbS2[ number ]
fbVf NA fbVf p50 fat body fifth instar larval stage D3 female cloned into pUC18 SmaI Sma!-Blunt-end sequenced from M4 primer (direction unknown) fbVf[ number ]
fcaL NA fcaL HABATAKI corpora allata fifth instar larval stage mixed pGCAP1, G-capping, full-length Unknown Sequenced from 5' with T7 primer; Sequenced from 3' with modified pT primer fcaL[ number ]
fcP8 NA fcP8 p50T follicle cells pupal stage P8 female pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') fcP8[ number ]
fdpe NA fdpe NA diapause-destined embryo fertilized egg stage H12-40 mixed pGCAPI, G-capping, full-length Unknown Sequenced from 5' with T7 primer fdpe[ number ]
fe8d NA fe8d p50T embryo fertilized egg stage H200 mixed pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer fe8d[ number ]
fepM NA fepM p50T epidermis fourth molting stage mixed pGCAPI, G-capping, full-length Unknown Sequenced from 5' with T7 primer fepM[ number ]
ffbm NA ffbm p50T fat body fifth instar larval stage male pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer ffbm[ number ]
fmgV NA fmgV p50T midgut fifth instar larval stage D2 mixed pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer fmgV[ number ]
fmxg NA fmxg p50T maxillary galea fifth instar larval stage D3 mixed pGCAPI, G-capping, full-length Unknown Sequenced from 5' with T7 primer fmxg[ number ]
fner NA fner p50T mixture of nervous system and brain fifth instar larval stage mixed pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer fner[ number ]
fphe NA fphe p50T pheromone gland adult stage D0 female pGCAPI, G-capping, full-length Unknown Sequenced from 5' with T7 primer; Sequenced from 3' with modified pT primer fphe[ number ]
fprW NA fprW p50T prothoracic gland wandering stage mixed pGCAPI, G-capping, full-length Unknown Sequenced from 5' with T7 primer; Sequenced from 3' with modified pT primer fprW[ number ]
ftes NA ftes p50T testis fifth instar larval stage male pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer ftes[ number ]
fufe NA fufe p50T embryo unfertilized egg stage mixed pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer fufe[ number ]
fwd- NA fwd- p50T wing disc fifth instar larval stage;spinning stage mixed pCMVFL3, Oligo-cap, full-length Unknown sequenced from 5' fwd-[ number ]
fwgP NA fwgP p50T wing pupal stage mixed pGCAP10, V-capping, full-length Unknown Sequenced from 5' with PGCAP-F-21 primer; Sequenced from 3' with degenerate oligo dT primer fwgP[ number ]
heS0 NA heS0 C108 hemocyte spinning stage S0 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') heS0[ number ]
J150 NA J150 J150 midgut fifth instar larval stage D2 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') J150[ number ]
maV3 NA maV3 p50 Malpighian tubule fifth instar larval stage D3 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') maV3[ number ]
MFB- NA MFB p50T fat body fifth instar larval stage mixed pGCAPI, G-capping, full-length Unknown Sequenced from 5' with T7 primer MFB-[ number ] Microbe-infected fat body
mg-- NA mg-- p50 midgut fifth instar larval stage D3 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') mg--[ number ]
MSV3 NA MSV3 p50T middle silkgland fifth instar larval stage D3 mixed pGADT7 Unknown Sequenced from 5' with T7 primer; from 3' with AD primer MSV3[ number ]
N--- NA N--- Unknown ovary-derived cell-line NA Unknown pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') N---[ number ] BmN cultured cell
Nnor NA Nnor Unknown cell NA Unknown pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') Nnor[ number ] BmN normalized library
NRPG NA NRPG p50 pheromone gland adult stage female pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') NRPG[ number ] p50, Normalized Library
NV02 NA NV02 Unknown ovary-derived cell-line BmNPV infected 2H Unknown pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') NV02[ number ] BmN cultured cell
NV06 NA NV06 Unknown ovary-derived cell-line BmNPV infected 6H Unknown pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') NV06[ number ] BmN cultured cell
NV12 NA NV12 Unknown ovary-derived cell-line BmNPV infected 12H Unknown pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') NV12[ number ] BmN cultured cell
ovS0 NA ovS0 p50T ovary spinning stage S0 female pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') ovS0[ number ]
ovS3 NA ovS3 p50 ovary spinning stage S3 female pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') ovS3[ number ]
P5PG NA P5PG p50 pheromone gland pupal stage P5 female pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') P5PG[ number ]
pg-- NA pg-- Shuko x Ryuhaku pheromone gland adult stage D0 female pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') pg--[ number ]
prgv NA prgv p50 prothoracic gland fifth instar larval stage D4 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') prgv[ number ]
ps4M NA ps4M p50 posterior silkgland fourth molting stage mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') ps4M[ number ]
PSV3 NA PSV3 p50 posterior silkgland fifth instar larval stage D3 mixed pGADT7 Unknown Sequenced from 5' with T7 primer; from 3' with AD primer PSV3[ number ]
tesS NA tesS p50 testis spinning stage S3 male pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') tesS[ number ]
vg4M NA vg4M p50T Verson's gland fourth molting stage D2 male pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') vg4M[ number ]
wdS2 NA wdS2 C108 wing disc spinning stage S2 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') wdS2[ number ]
wdS3 NA wdS3 C108 wing disc spinning stage S3 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') wdS3[ number ]
wdV3 NA wdV3 C108 wing disc fifth instar larval stage D3 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') wdV3[ number ]
wdV4 NA wdV4 C108 wing disc fifth instar larval stage D4 mixed pBluescript SK- EcoR1 for 5' Xho1for 3' sequenced from T3 primer (5' -> 3') wdV4[ number ]