| Class |
Name |
File |
Format |
Size |
Date |
RAMEN assemble
scaffolds and contigs |
Assembled set (scaffolds, and contigs not used in scaffolds.) |
assembledset.txt.gz |
FASTA |
127.6(MB) |
Apr-2008 |
Integrated sequence (scaffolds and contigs aligned on each chromosome are connected in its order.) |
integretedseq.txt.gz *1 |
FASTA |
111.5(MB) |
Scaffolds |
scaffold.txt.gz |
FASTA |
118.0(MB) |
Contigs |
contig.txt.gz |
FASTA |
128.4(MB) |
Repeat sequences |
BmTE Library (Transposable elements library) |
BmTELib-080930.txt.gz |
FASTA |
0.6(MB) |
Jan-2009 |
Gene model |
Consensus gene set (CDS) by merging all the gene sets using GLEAN |
glean_cds.txt.gz |
FASTA |
6.0(MB) |
Apr-2008 |
| Consensus gene (translated) set by merging all the gene sets using GLEAN |
glean_pro.txt.gz |
FASTA |
3.9(MB) |
| Consensus gene set (CDS) by merging all the gene sets using GLEAN on Chromosomes |
glean_cds_on_chr.gff.gz |
GFF2 |
1.2(MB) |
| Consensus gene set (CDS) by merging all the gene sets using GLEAN on Scaffolds |
glean_cds_on_scaf.gff.gz |
GFF2 |
0.9(MB) |
BAC, Fosmid |
BAC (55 BACs assembled sequence) |
bac.txt.gz |
FASTA |
2.5(MB) |
BAC end (137,219 BAC ends sequence) |
bacend.txt.gz |
FASTA |
24.2(MB) |
Fosmid end (274,342 fosmid ends sequence) |
fosend.txt.gz |
FASTA |
35.0(MB) |
